KEGG   Manihot esculenta (cassava): 110612365
Entry
110612365         CDS       T05761                                 
Name
(RefSeq) syntaxin-52
  KO
K08503  syntaxin of plants SYP5
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    110612365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mesc04131]
    110612365
Membrane trafficking [BR:mesc04131]
 SNARE
  SNAP-25[C] (Qc)
   STX8
    110612365
SSDB
Motif
Pfam: SNARE Syntaxin-6_N NPV_P10 LIF_OSM Hemerythrin FUSC CLZ Tropomyosin
Other DBs
NCBI-GeneID: 110612365
NCBI-ProteinID: XP_021608827
Position
3:complement(26164765..26168285)
AA seq 233 aa
MASSTDPWMKEHNEAAKLAEDINGMIAERSSFPASGPDTQRHASAIRRKITILGTRLDSL
QSLLTKLPGKQKISEKEMNRRRDMVANLRTKVNQMASTLNMSNFANRDSLLGPEIKPADA
MRRTEGLDNHGIVGLQRQIMKEQDEGLEKLEETVTSTKHIALAVNEELDLHTRLIDDLDQ
HVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLSVVGIVGLVVVIYLLIKYL
NT seq 702 nt   +upstreamnt  +downstreamnt
atggcatcttctacagacccatggatgaaggaacataatgaagctgcaaagcttgcagag
gatatcaatggcatgattgcagaaaggagttcttttcctgcatcagggcctgacacacag
cgtcatgcatctgctattcggaggaagattacaattttagggacaaggcttgatagctta
cagtcccttttgacaaagcttcctgggaagcagaaaatatcagagaaagagatgaatcgt
cgcagggacatggttgcaaatttgagaacaaaagtaaaccaaatggcttccacattgaat
atgtcaaactttgccaacagggatagcttgttgggtccagaaataaagccagctgatgcc
atgcgtagaactgaaggtctggacaaccacggcattgtcggtcttcagcggcaaattatg
aaagagcaagatgagggccttgaaaagttggaggagacagtaacaagtacaaaacatatt
gcactggcagtcaatgaagaacttgatcttcacactagacttattgatgacttggatcaa
cacgtggatgttactgattcccgcttacggcgagtgcagaagaatctggccgtgctgaac
aagcgtacaaagggaggctgctcctgcttgtgcatgcttttatctgttgtcgggattgtg
ggtctggttgtcgtcatatatttactgataaaatatctgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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