KEGG   Manihot esculenta (cassava): 110612954
Entry
110612954         CDS       T05761                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03420  Nucleotide excision repair
mesc04120  Ubiquitin mediated proteolysis
mesc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110612954
   04120 Ubiquitin mediated proteolysis
    110612954
  09124 Replication and repair
   03420 Nucleotide excision repair
    110612954
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mesc04121]
    110612954
   03400 DNA repair and recombination proteins [BR:mesc03400]
    110612954
Enzymes [BR:mesc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     110612954
Ubiquitin system [BR:mesc04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   110612954
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     110612954
   Cul2 complex
     110612954
   Cul3 complex
     110612954
   Cul4 complex
     110612954
   Cul7 complex
     110612954
   Cul8 complex
     110612954
   Cul9 complex
     110612954
DNA repair and recombination proteins [BR:mesc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      110612954
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      110612954
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 110612954
NCBI-ProteinID: XP_021609514
Position
4:34354488..34356503
AA seq 116 aa
MDIDVTMVPAGEASSSVAGPSSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 351 nt   +upstreamnt  +downstreamnt
atggatatcgacgtaaccatggtcccagcaggcgaggccagctcaagcgtcgccggacct
tcatcttccaccaagaagcccaaacgtttcgaaatcaagaagtggaatgccgtcgctctt
tgggcctgggatattgttgtggataattgtgcgatttgcaggaaccatattatggatcta
tgcattgagtgccaagcgaatcaagcaagtgctaccagtgaggagtgcactgttgcctgg
ggggtgtgcaatcatgcttttcacttccactgtatcagccgatggctcaaaacccgccaa
gtgtgccctcttgataatagtgagtgggaattccagaagtatggccactag

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