KEGG   Manihot esculenta (cassava): 110615984
Entry
110615984         CDS       T05761                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03013  Nucleocytoplasmic transport
mesc03015  mRNA surveillance pathway
mesc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110615984
  09122 Translation
   03013 Nucleocytoplasmic transport
    110615984
   03015 mRNA surveillance pathway
    110615984
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mesc03019]
    110615984
   03041 Spliceosome [BR:mesc03041]
    110615984
Messenger RNA biogenesis [BR:mesc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110615984
Spliceosome [BR:mesc03041]
 Complex C
  Other components
   EJC/TREX
    110615984
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 110615984
NCBI-ProteinID: XP_021613956
Position
5:4649658..4652480
AA seq 151 aa
MAMAAEDDEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPA
VLKECRRIISESEIMKEDDANWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKD
PEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq 456 nt   +upstreamnt  +downstreamnt
atggcaatggctgcagaagacgatgagttctaccttcgatattacgtgggacacaagggg
aaatttggccacgaattccttgagttcgagtttaggccagatggcaagcttcgatacgcc
aacaattccaattacaagaacgacaccatgatccgcaaggaggtcttcctcacccctgcc
gtccttaaggagtgccgtcgtatcatctcagagagcgagataatgaaggaagacgatgcc
aactggccagaaccagacagggttgggcgacaagagcttgagattgtgatgggtaacgag
catatctccttcactacctccaagattgggtcgcttgttgatgtccagagtagtaaggat
cctgaaggacttcgcatcttctattaccttgttcaggacttgaagtgctttgtcttctct
cttatctcactacacttcaagatcaagcctatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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