KEGG   Manihot esculenta (cassava): 110617279
Entry
110617279         CDS       T05761                                 
Name
(RefSeq) histone deacetylase 5 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mesc03036]
    110617279
Enzymes [BR:mesc01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     110617279
Chromosome and associated proteins [BR:mesc03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     110617279
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 110617279
NCBI-ProteinID: XP_021615655
Position
6:complement(22020676..22027459)
AA seq 665 aa
MQQLESGETMTIQRRVGLLYDERMCKHHTPDDDYHPENPYRIKAIWNKLLANNIPQRCVV
LNAKEAEDKYLLAVHSKNHVNLIRNISSNQFDSRRNRIALKFNSIYFNDGSSEAAYIAAG
SVVEVAERVAKGELHSSAAIVRPPGHHAEHDEAMGFCLFNNVAVAASYLLDERPELGIKK
ILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEFGNFYPANDDGFYTMIGEGPGAGYNIN
VPWENGRCGDADYLAVWDHILIPVAKEFDPDMILVSAGFDAAIGDPLGGCRVTPYGYSVM
LKKLMDFAHGKIVLALEGGYNLDSIANSFLACMEVLLESKPIAGSSEAYPFESTWRVIQA
VRKKLSAYWPSLADEIPLKLTSQKAPPAHLLISSSDSEDEDEKSPNIVSDNMVKVVQEIV
EPLSKLKVEDIHGKDQVARESVPWRSELSKMEIWYATYGSNMWKRRFLCYIQGGQVDGMR
KPCPGSMDKNPPKEILWKTFSRRLFFGRESTRTWGPGGVAFLNPETSVDEKTYICMYRIT
LEQFNDVLFQENIALQENVSSCEMGSPAFHLADLESVEKHGSMSLEVFKKGWYHNVVYLG
KEQDIPILTMTCSLSDVERFKSGKVPLCAPCKEYANTLIQGLIEGGQFSEEEAITYIEEA
SSKPI
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgcagcagcttgaatctggtgagaccatgaccattcaacggcgcgtggggttactgtac
gatgagcggatgtgtaagcatcacactcctgatgatgattaccatcctgagaacccctat
cgcatcaaggctatttggaacaagctcctagccaacaacattcctcaaagatgtgttgtt
ctaaatgccaaagaagcagaagataaatatctactggctgttcactccaagaatcatgtt
aatttgataagaaatataagctccaatcaatttgattctcgaagaaatagaattgcttta
aaatttaattccatatacttcaatgacggatcatcagaagctgcctacattgctgctggt
tctgttgtggaggttgctgagagagtagccaaaggggaactgcattcttctgctgctatt
gttaggcctcctggacatcatgctgaacatgatgaggcaatgggattttgtctattcaat
aatgtcgccgttgcagcaagttatctattagatgaaagaccagaactgggtattaaaaag
attctgattgttgactgggatgttcatcatggtaatggcactcaaaagatgttttggaag
gaccctcgtgttctgttcttctctgttcataggcatgagtttgggaacttttaccctgca
aatgatgatggtttttatactatgattggggaagggccaggtgcaggatataacataaat
gttccttgggagaatggaagatgtggagatgcagactatcttgctgtttgggaccatatc
ttgatccctgttgccaaggaatttgatcctgacatgattttagtgtctgcagggtttgat
gcagctatcggtgatcctcttggcggctgccgtgtcacaccctatggatattcagtaatg
ttgaaaaagttaatggattttgctcatggtaagattgtgttggcattagaaggaggttac
aatcttgactctatagcaaattctttccttgcatgcatggaagttttgcttgaaagcaag
cctattgctggatcttcagaggcctatccatttgagtccacatggcgtgtaatacaagcg
gttcgaaagaaattaagtgcttactggccttcacttgcagacgaaatacccttgaagtta
actagtcagaaagctcctcctgcgcatcttttgatctcaagctctgattctgaagatgag
gatgaaaaatctccaaacattgtgtcagataatatggtgaaagttgttcaggagattgtt
gaacctctttcaaagctgaaagttgaagatattcatggcaaggatcaagtggccagagag
tctgtcccctggagatcagagctttcaaagatggagatttggtatgccacttatggatca
aatatgtggaaacgaaggttcctttgctatattcagggcggtcaggtggatggtatgagg
aagccgtgccctggttcaatggataaaaaccctccaaaagagatcttgtggaaaactttc
tcccgcagattgttctttggccgtgaatcaacacgtacatggggtcctggaggagttgca
ttccttaatcctgaaactagcgttgatgaaaaaacttacatatgcatgtacagaatcacg
ttggagcagttcaatgatgttttgtttcaagaaaatatagcgcttcaagaaaatgtttct
agttgtgagatgggttctccagcctttcatttggcagatctagagtccgtcgaaaaacat
ggatctatgtctttggaggtttttaagaagggttggtaccataatgtagtgtacttgggg
aaggagcaggatattcccatactgactatgacctgctcactttcagatgttgagaggttt
aaatcgggaaaagttcccctttgtgccccttgcaaagaatatgctaataccttaatacaa
ggcctgattgaaggagggcagttctcagaagaggaagccattacctacatagaagaagct
tcttcaaaaccaatatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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