KEGG   Manihot esculenta (cassava): 110617494
Entry
110617494         CDS       T05761                                 
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
  KO
K03267  peptide chain release factor subunit 3
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110617494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mesc03019]
    110617494
   03012 Translation factors [BR:mesc03012]
    110617494
Messenger RNA biogenesis [BR:mesc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     110617494
Translation factors [BR:mesc03012]
 Eukaryotic type
  Release factors
   110617494
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 G-alpha
Other DBs
NCBI-GeneID: 110617494
NCBI-ProteinID: XP_021616006
Position
6:1403192..1422694
AA seq 525 aa
MVYLWLLFVLMVDIEEEIRSLQLDSAAEDNTGVINPEDAKLEEVEKLDRMEEDSKDDVSL
NSKDVQAESKVKDKAVSAPGDVETPDEMEEDNKKRHLNVVFIGHVDAGKSTTGGQILFLS
GQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILD
APGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVV
VNKMDDPTVNWSKERYDEIESKMIPFLKSSGYNVKKDVLFLPISGLLGTNMKTRIDKSVC
SWWNGPCLFEALDAVEVPLRDPKGPFRMPIIDKFKDMGTVVMGKVESGSITEGDSLLVMP
NKTQVKVVAVYCDETKVRCAGPGENLRVRLSGIDDEDILAGFVLSSIAKPIASVTEFVAQ
LQILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVV
SRVQVNNMICIEKFADFPQLGRFTLRTEGKTVAVGKVTGLPSVSS
NT seq 1578 nt   +upstreamnt  +downstreamnt
atggtttacctgtggttactctttgttttgatggtagatattgaggaggagattcgctcg
ttacaacttgactctgcagcagaagataatactggagttattaacccagaagatgcaaag
ttggaggaagtggagaagttggatagaatggaggaagattctaaagatgatgttagtctc
aactctaaggatgtgcaggctgagtccaaagtaaaagataaggcagtatctgctccagga
gatgttgaaacaccagatgagatggaagaagacaataagaagcggcacttgaatgtggtt
tttattggccatgttgatgctggcaagtccacaactggagggcagatacttttcttaagc
ggtcaggttgatgatcggacaatccaaaaatatgagaaagaagctaaggacaagagtaga
gaaagctggtacatggcatatattatggatactaatgaagaggagagggttaagggtaaa
acagttgaagtgggaagagcacattttgaaacagagacgactagatttacaattttagac
gcaccgggtcacaagagttatgttcctaatatgattagtggagcctctcaagctgatatt
ggtgtactggtgatttctgctcggaaaggagaatttgaaactgggtatgaaagaggtggg
cagacccgtgaacatgttcagcttgcaaagacattaggggtctcgaagcttctcgtcgtt
gtaaataaaatggatgatcccactgtgaactggtcaaaagaaaggtatgatgaaattgaa
tcaaagatgataccgtttctaaagtcttcaggctataatgtgaagaaagatgtcctgttc
ctaccaatatctgggctgcttggtacaaatatgaaaactagaatagataaaagtgtgtgt
tcatggtggaatggcccgtgtctttttgaagctctagatgctgttgaggttcctctacga
gatccaaaaggtccttttaggatgcctattattgacaaatttaaagatatgggaactgta
gtcatgggcaaagtagaatctggtagtattactgagggcgattccttgttggtcatgcca
aataaaactcaggtgaaagttgttgctgtatattgtgatgaaaccaaagttaggtgtgcg
gggcctggagaaaatcttcgtgttagattatctgggattgatgatgaggatatattggca
ggttttgtcttgtcaagtattgcaaagccaatagcttcagttacagaatttgttgctcaa
ctgcaaatccttgaattgctggacaacgcgatttttacagctggctataaggctgttttg
cacattcattctgtagttgaggaatgtgagattgttgaactgctacaacaaattgatcca
aagacaaagaaacctatgaaaaagaaagtcctctttgtgaagaatggtgctgttgttgtg
tctcgcgttcaggtaaataacatgatatgcattgagaagtttgcagattttcctcaactt
ggcaggtttactcttcgtactgaagggaaaacagttgctgtggggaaagtcactggactt
ccttcagtttctagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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