KEGG   Manihot esculenta (cassava): 110625979
Entry
110625979         CDS       T05761                                 
Name
(RefSeq) elongation factor-like GTPase 1
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    110625979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mesc03009]
    110625979
Ribosome biogenesis [BR:mesc03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    110625979
SSDB
Motif
Pfam: GTP_EFTU EFG_C EFG_III GTP_EFTU_D2 SRPRB EFG_IV RNase_3_N MMR_HSR1 Phage_tail_L
Other DBs
NCBI-GeneID: 110625979
NCBI-ProteinID: XP_021627381
Position
11:23906968..23910750
AA seq 1027 aa
MGDYDAQKIRNICILAHVDHGKTTLADHLIAATGGGLLHPKMAGKLRFMDYLDEEQRRAI
TMKSSSIALHYKDYSINLIDSPGHMDFCCEVSTAARLSDGALILVDAVEGVHIQTHAVLR
QSWIEKLTPCLVLNKIDRLIYELKLSPVEAYNRLLRIVHEVNGIMSTYKSEKYLSDVDSL
LAGPSGEVDYENLEFIEDDEEDTFQPQKGNVAFVCALDGWGFGISEFAEFYASKLGASSA
ALQKALWGPRYFNPKSKMIVGKKGVEGGSKARPMFVQFVLEPLWQVYQSALEPDGNKGLL
EKVIKSFNLNVPPRELRNKDPKVVLQAVMSRWLPLSDAILSMVVKCMPDPIVAQSFRISR
LLPKREVLHDAVDLSIIAEADLVRKSVEICDSSPEAPSVAFVSKMFAVPRKMLPQRGPNG
EILNNHSDENGSHESDECFLAFARIFSGVLYSRQRVFVLSALYDPLKVESMQKHVQDAEL
HSLYLMMGQGLKPVASAKAGDIVAIQGLGQHILKSATLSSTRNCWPFSSMAFQVSPTLRV
AIEPSDPADMTTLMKGLRLLNRADPFVEVTVSSRGEHVLAAAGEVHLERCIKDLKERFAK
VSLEVSPPLVSYKETIEGHTANALDNLKSLSRSSDYVEKTTPNGRGVVRVQVMRLPPALT
KVLDESVDILGDIIGGRLGQTNKDVEKQGSTIVHDDNSIEGLKKRIMDAVDGEISSWSGT
DKDRAEKYKHKWQKFLRRIWALGPRQVGPNILFTPDLKSKSNDFSVLVRGSPHVSERLGL
VDNSSDGDMPADPSSEATKILEIEAESLQNSIVSGFQLATAAGPLCDEPMWGVAFLVEVY
ISPLAEQSDESDINQQSEQHGIFTGQVMTAVKDACRAAVLQNKPRLVEAMYFCELNTRTE
YLGSMYAVLNRKRARVLKEEMQEGSPLFTVHAYVPVSESFGFADELRRWTSGAASALLVL
SHWEVLPEDPFFVPKTEEEIEEFGDGSSVLPNTARKLINAVRRRKGLPVEEKIVQHATKQ
RTLARKV
NT seq 3084 nt   +upstreamnt  +downstreamnt
atgggtgattatgatgcccaaaaaatccgaaatatatgcatattagctcatgttgatcat
ggcaagacaacacttgctgaccacctaattgctgccactgggggtggtctgcttcaccca
aaaatggctgggaagcttaggtttatggattatcttgatgaggaacagagacgtgcaata
acaatgaagagctcttcaatagctcttcattataaagactattcaataaacctcatagat
tctcctggtcatatggatttttgttgtgaggtttctactgctgccagattgagtgatggg
gcattgattttggttgatgctgttgagggggttcatatacagacacatgctgttttgcgt
cagtcttggattgagaagctcacaccatgtttggtgcttaataagattgacaggttgatt
tatgagttgaagttgagtcccgtggaagcatataatcggttgcttaggattgttcatgag
gttaatgggatcatgagtacatataagagtgagaaatatctttctgatgtagactcatta
cttgctgggccatctggggaagtggattatgagaatcttgagtttatagaagatgacgag
gaggatacctttcaaccacagaaggggaatgtggcatttgtatgtgcattggatgggtgg
ggttttggtattagtgagtttgctgaattttatgcttcaaagcttggtgctagttcagct
gcattgcagaaggctctgtggggtcctaggtatttcaatcccaagagtaagatgattgtg
gggaagaagggagtggaaggaggaagtaaggcccggcctatgtttgtgcagtttgtgctt
gagccattgtggcaggtttaccagtcagccttggagcctgatggaaataaaggtttactt
gagaaggtcattaagtcatttaatttgaatgtaccaccacgtgaacttcggaataaggat
ccaaaggttgtgcttcaagctgttatgagccgctggcttccattgtctgatgcaattttg
tcaatggttgtgaagtgtatgccagatccaattgttgctcagtcttttcgaatttcacgt
ttgctgcccaagagagaggttttgcatgatgcagttgacttgagtattattgcagaggca
gatcttgtgagaaagtcagttgagatttgtgattccagccctgaagcaccttctgttgct
tttgtgtccaaaatgtttgcagtaccaagaaagatgctacctcaaaggggaccaaatggt
gagattttgaacaatcacagtgacgaaaatggaagtcatgaatcagatgagtgcttcctt
gcgtttgcaagaatttttagtggggttctttactcacggcaaagagtctttgtgctttca
gcattatatgacccattgaaggtagagtccatgcagaagcatgtgcaggatgctgagctg
cactctttatatctcatgatgggtcaaggcttgaaaccagtagcttctgcaaaagcagga
gatattgtggcaatccaaggcctcggtcaacatattttaaaaagtgcaactctttcatcc
acaagaaactgttggcctttctctagcatggcattccaggtttcccctactttaagagtt
gcaattgagccgtctgatccagcagacatgacaactctgatgaagggtctgaggcttctg
aaccgggctgatccctttgtagaggtaactgtctcttctagaggggagcatgtgcttgct
gctgctggagaagttcacctagaaaggtgcatcaaggatttgaaggagagatttgcaaaa
gtgagcctggaagtctctccacctcttgtgtcctataaggagaccatagaagggcacacg
gccaatgctttagataatctgaaatcactaagtagaagctccgattatgtggagaagaca
acaccaaatggaaggggcgttgttcgtgtgcaagtcatgagacttcctcctgcactaacc
aaagttctggatgaaagtgttgacatccttggagatattattggtgggaggctggggcag
acaaataaagatgtggaaaagcagggttcgaccattgtacatgatgataattcaattgaa
ggactcaaaaaacgcataatggatgctgtggatggtgaaatatcatcatggagtgggact
gacaaggatcgagctgagaaatacaaacacaagtggcaaaaatttcttaggaggatttgg
gcacttggtccaaggcaggttggccctaatatcctcttcactccagatttgaaaagcaag
agcaatgatttctctgttcttgtgcggggttctcctcatgtatccgaaagattaggctta
gtggataattccagtgatggtgatatgcctgctgacccttcctctgaagcaactaaaata
ttggaaatcgaagcagagagtcttcagaacagcatagtgtctggattccaacttgcaaca
gcagctggacctctatgtgatgaaccaatgtggggagtggcttttttggttgaggtttac
atatctccattagctgagcaatctgacgagtctgacattaaccaacaatctgagcagcat
ggcatcttcacaggacaggttatgacagcagtcaaggatgcgtgtagagcagctgtactt
cagaacaaacctcggcttgttgaagcaatgtatttttgtgagttgaacacccgaactgaa
tatttgggctccatgtatgcagtgcttaatcggaaacgggctcgggtcttgaaggaggag
atgcaggaagggtctccacttttcacggttcatgcatatgtcccagtttctgagagcttt
ggttttgctgatgagctcagaagatggacttcaggagcagcaagtgcactgcttgttctt
agccattgggaagtacttcccgaggatcctttctttgtcccaaaaacagaagaggaaatt
gaagagtttggagatggttccagtgttctgcctaatacagctagaaagctcattaatgct
gttaggcggcggaagggcttgcctgtggaagaaaaaatagtccagcatgctactaaacag
aggacattggctcgtaaagtgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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