KEGG   Manihot esculenta (cassava): 110626500
Entry
110626500         CDS       T05761                                 
Name
(RefSeq) probable histone H2A variant 3
  KO
K11251  histone H2A
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110626500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mesc03036]
    110626500
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mesc04147]
    110626500
Chromosome and associated proteins [BR:mesc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    110626500
Exosome [BR:mesc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110626500
SSDB
Motif
Pfam: Histone Histone_H2A_C CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 110626500
NCBI-ProteinID: XP_021628111
Position
11:complement(6159962..6163131)
AA seq 134 aa
MSGKGAKGLITGKSTLNNKDKDKKKPVSRSSRAGLQFPVGRVHRLLKTRVSANGRVGATA
AVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI
PHIHKSLINKSSKE
NT seq 405 nt   +upstreamnt  +downstreamnt
atgtcgggcaagggagccaaaggcttgattacgggcaaatccactcttaataacaaagac
aaggacaagaagaagcctgtctctcgctcctctcgcgctggtctccagtttcctgtgggg
cgggttcatcgactattgaaaaccagggtgtctgctaatggaagggttggggcaacagct
gctgtttatacagcagctatcctggagtatcttactgctgaggtgttagagctggcaggg
aatgcaagcaaggatctgaaggtgaaacgtataacaccaaggcatttacaacttgctata
cgaggggatgaagaacttgacaccctcatcaaaggaacaatcgctggaggtggagttatc
ccgcacattcacaaatctctaatcaacaaatcctccaaagagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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