KEGG   Manihot esculenta (cassava): 110630795
Entry
110630795         CDS       T05761                                 
Name
(RefSeq) elongator complex protein 3
  KO
K07739  elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mesc03016]
    110630795
Enzymes [BR:mesc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.311  tRNA carboxymethyluridine synthase
     110630795
Transfer RNA biogenesis [BR:mesc03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    110630795
SSDB
Motif
Pfam: Radical_SAM_C Radical_SAM Acetyltransf_10 Acetyltransf_1 Acetyltransf_7 FR47
Other DBs
NCBI-GeneID: 110630795
NCBI-ProteinID: XP_021634072
Position
14:4739214..4744439
AA seq 565 aa
MATAMISETKKAPRPGRGGYQAHGMTEEEARVRAIAEIVNSMVELSRKNQTVDLNAIKSA
ACRKYGLARAPKLVEMIAALPESERDSLLPKLRAKPVRTASGIAVVAVMSKPHRCPHIAT
TGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDK
VEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIETRP
DYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAH
MMPDLPNVGVERDLESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQ
LVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTR
EAGIQDIHHKIKPEEVELVRRDYTANEGWETFISYEDARQDILVGLLRLRKCGCNVSCPE
LMGKCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARREHRSTKIAVISGV
GTRHYYRKLGYELEGPYMVKSLEAC
NT seq 1698 nt   +upstreamnt  +downstreamnt
atggcgacggcaatgatctcggagaccaaaaaggcgccgcggccggggcggggcggatac
caagctcacggcatgactgaagaggaagctcgtgtacgagccatagcagaaatcgtcaac
tccatggtggaactctcgcgaaagaaccaaactgtggacctcaatgctattaaatccgcc
gcctgccgcaagtacggcctcgcgcgagccccgaaactcgtggagatgatcgcagctctt
ccggagtccgaacgagactcgctacttcctaagctccgcgccaagcctgtccgtactgcc
tccggaatcgcggtcgtggccgtcatgtcgaaaccacatcggtgcccccatattgcaaca
acgggaaacatttgcgtttattgtcctggtggaccggactcagattttgagtacagcaca
caatcctacactggctatgaacctactagcatgcgtgcaattcgagccagatataaccca
tatgttcaggctagaagcaggattgatcaacttaagcggttgggccacagtgtagataag
gttgagttcatattgatgggtggtactttcatgtcattgccagcggactaccgtgattac
tttataaggaatcttcatgatgctttgtcaggacacacttctgccaatgttgaagaggca
gttgcttactctgagcatagtgccacaaagtgtattggcatgacaattgaaacgaggcca
gattactgcctcggacctcatctacgtcaaatgctttcttatggttgtacgcgattggag
attggagttcaaagcacatatgaggatgttgctcgggatactaatagaggacacacagta
gcagctgttgctgattgtttttgcttggcaaaggatgctgggttcaaggttgttgctcat
atgatgcctgatcttccaaatgttggagtagagagggaccttgaaagttttagggagttc
tttgagagtcctttatttagagcagatgggctgaaaatttaccccacacttgtaattcga
ggaactggactttatgagctttggaaaactggcagatatagaaattacccacctgagcaa
ctcgtagatattgtagctcggatcctagccatggtgcccccttggacacgtgtttataga
gttcaacgggatattcctatgccattggttacatctggggttgagaagggaaatctcagg
gagctagctttagctcgaatggatgacttgggtttaaaatgccgtgatgtccgtacacgt
gaggctggaatccaggacattcatcacaaaattaagccggaagaagttgagctcgttcgc
cgtgattatacagcaaatgaaggttgggaaacatttatttcatacgaggatgcaagacag
gatatccttgttggtttgttacgattgcgaaagtgtggttgcaatgtttcttgtccagag
ctcatgggcaagtgctctattgttcgtgaactccacgtatatgggactgctgttcctgtt
catgggcgtgatgcagacaagttgcaacaccagggttatggtactctattaatggaagag
gcagagcggattgctcgcagggagcatagatcaactaaaatagcagtgatttcgggcgtg
ggaacccgtcattattataggaaacttggctatgagcttgaaggcccctacatggttaaa
tctctcgaggcttgctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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