KEGG   Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2: EJ066_26610
Entry
EJ066_26610       CDS       T05904                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
mesm  Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2
Pathway
mesm03420  Nucleotide excision repair
mesm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mesm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EJ066_26610
   03430 Mismatch repair
    EJ066_26610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mesm03400]
    EJ066_26610
Enzymes [BR:mesm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EJ066_26610
DNA repair and recombination proteins [BR:mesm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EJ066_26610
   MMR (mismatch excision repair)
    Other MMR factors
     EJ066_26610
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PcrA_UvrD_tudor Viral_helicase1 AAA_11
Other DBs
NCBI-ProteinID: AZO00409
UniProt: A0A3S9BP31
Position
5483552..5486323
AA seq 923 aa
MSGFSEDMPFFDEPNARPTAPSGIAARAMAARSGRNDAPDYLKGLNPEQRLAVETTEGAV
LVLAGAGTGKTRVLTTRIAHILATGKAFPSQILAVTFTNKAAREMKQRIGLLIGEGNVEG
MPWLGTFHSIGVKLLRRHAELAGLKSDFTILDTDDVVRLIKQLIQAEGLDDKRWPAKQFA
QMIDGWKNKGLGPADIPEGDARSFANGKGRELYKAYQERLQTLNACDFGDLLCHPIRIFR
ANPDVLKEYHKRFRYILVDEYQDTNTAQYMWLRLLAQRPDASTKGARGDSGRPISPHVGE
MSGRTEGGAVERNPSHTAEFKSGKAGGTAPPSVGFADISPTRREIGRSSAETRASVNICC
VGDDDQSIYGWRGAEVDNILRFDKDFPGATIIRLERNYRSTAHILGTASHLIAYNEGRFG
KTLFTEKVAEDDEKVHVHAAWDSEEEARAVGETIEAYQRPDKQGNRHNLNDMAILVRASF
QMREFEDRFVTLGLNYRVIGGPRFYERLEIRDALAFFRVVAQGADDLAFERIVNVPKRGL
GEATIRQIHDTARALRIPMLEAAATLAESDELKPKPRAALREVAANFERWQKALETTPHT
ELAETILEESGYTDMWKNDRSVEAPGRLENLKELIRSMEEYESLRSFLEHVALVMDAEQN
AELDAVNIMTLHSAKGLEFETVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGLTRA
KKNLHLWFVSNRRIHGLWQSTIPSRFLEELPEAHVDVAESGNSYGGYGNSYGGGSFASGR
GGQGAGRQNPYGASRFDNVGEEKAGSFSNTYATPGWQRAQQNRTEATDRNWGSRSGHQVE
RIGYGETDSGYGAGRTSIKGRTIDGELVAKSVADTPSAFSVGDRVFHQKFGNGNISAIDG
NKLTIDFDKAGQKRVLDGFVTGV
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgtccggcttttcggaagacatgcccttttttgacgaaccgaatgcgcggcccacggcc
ccgtccggcatcgccgcgcgcgccatggccgcccgcagcgggcgcaacgacgcgcccgac
tatctgaaggggctcaaccccgagcagcggctcgcggtggagaccaccgaaggcgcggtg
ctggtgctggccggcgccggcaccggcaagacgcgcgtcttgaccacccgcatcgcccac
atccttgccaccggcaaggcattcccctcgcagatcctcgccgtcaccttcaccaacaag
gccgcgcgggaaatgaagcagcggatcggcctgctgatcggcgaaggcaatgtcgaaggt
atgccgtggctcggcactttccactcaattggcgtgaagctgctacgcagacacgccgag
cttgccgggctcaaatccgatttcaccattctcgacaccgacgacgtcgtgcgcctgatc
aagcagctcatccaggccgaagggctggacgacaagcgatggccggccaagcagttcgcc
cagatgatcgacggctggaagaacaaggggctgggccccgccgatattccggagggcgac
gcccgcagcttcgccaacggcaagggccgcgaactctacaaggcctaccaggagcggctg
cagacgctgaacgcctgcgatttcggcgatctcctgtgccacccgatccgcatcttccgc
gccaatccggacgtgctgaaggaataccataagcgcttccgctacatccttgtcgacgag
tatcaggacaccaacaccgcgcagtacatgtggctacgcctgctcgctcaaaggccggat
gcttcgacgaagggcgcgcgcggcgacagcggccgcccaatctccccccatgtgggggag
atgtccggcaggacagaggggggcgccgtagagcgcaacccttcccacacagcggaattc
aaaagtggaaaggccggcgggacagcgcccccctctgtcggcttcgccgacatctccccc
acaaggagggagattgggcgctcttcagccgaaacccgtgccagcgtaaatatctgttgc
gtcggcgacgacgaccaatccatctatggctggcgcggcgccgaggtcgacaacatcctg
cgcttcgacaaggatttccccggcgccaccatcatccggctggagcgcaactaccgctcc
accgcgcacatcctcggcacggcctcccacctcatcgcctacaatgagggccgcttcggc
aagacgctgttcaccgaaaaagtcgccgaggacgacgagaaggtgcacgtccacgccgcc
tgggattccgaggaggaggcccgcgctgtcggcgagaccatcgaggcctaccagcgccca
gataaacaaggaaatcggcacaatctcaacgacatggccattctggtccgcgcgtccttc
cagatgcgcgaattcgaggaccgcttcgtcacgctcggcctcaactaccgcgtcatcggc
gggccgcgcttctatgaacgcctcgaaatccgcgatgcgctggccttcttccgtgtcgtc
gcgcaaggcgccgacgacctcgctttcgagcgcatcgtcaacgtgccgaagcgcgggttg
ggcgaagccaccattcgccagatccacgacacggcgcgcgcgctgcgcatcccgatgctg
gaggccgccgccacgctcgccgagagcgacgagctgaagccgaagccgcgcgcggcactg
cgcgaggtcgccgccaatttcgagcgctggcagaaggcgctggaaaccacgccgcatacc
gagcttgccgagaccatcctggaggagagcggctacaccgacatgtggaaaaacgaccgc
tcggtggaggcccccggccggctggaaaatctgaaagaactgatccgctccatggaggag
tatgaatcgctgcgctccttcctcgagcacgtcgcactggtcatggacgccgagcagaac
gccgagctcgacgccgtcaacatcatgacgctgcattcggccaagggcctcgaattcgag
accgtttttctccccggctgggaggaaggtctttttccccaccagcgcgccctcgatgaa
ggcgggcgctctggcctcgaggaagagcgccgcctagcctatgtcgggctgactcgcgcc
aagaagaacctgcacctctggttcgtctcaaatcgccgcattcacgggctgtggcaatcg
accataccgtcgcgctttctcgaggaactgccggaagcccatgtcgatgtcgccgagagc
ggcaactcctatggcggctacggcaattcctatggcggcggatcgttcgcctccggacgg
ggcggccaaggggcaggaagacagaacccttacggcgcttcgcgcttcgacaatgttggc
gaggaaaaggcgggaagcttctccaacacctatgcaacgccgggctggcagcgcgcgcaa
cagaaccgcaccgaggcgaccgaccgcaactggggctcgcgttccggccaccaggtcgag
cgcatcggctatggcgagaccgactccggctatggcgccggccgcacctcgatcaagggc
cgcaccatcgacggcgagctggtcgccaaatccgtcgccgatacgccgtccgccttcagc
gtcggcgaccgcgtcttccaccagaaattcggcaacggcaacatatcagccatcgacggc
aacaagctgaccatcgacttcgacaaggccggccagaaacgcgtgctggacgggtttgtc
actggcgtttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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