KEGG   Aquibium oceanicum: BSQ44_04980
Entry
BSQ44_04980       CDS       T04603                                 
Name
(GenBank) recombination protein RecR
  KO
K06187  recombination protein RecR
Organism
meso  Aquibium oceanicum
Pathway
meso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:meso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BSQ44_04980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meso03400]
    BSQ44_04980
DNA repair and recombination proteins [BR:meso03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BSQ44_04980
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BSQ44_04980
SSDB
Motif
Pfam: Toprim_4 RecR_C RecR_HhH Toprim RecR_ZnF PHF5 SlpA_C HHH_5
Other DBs
NCBI-ProteinID: APH70806
UniProt: A0A1L3SN16
Position
complement(994327..994932)
AA seq 201 aa
MSKRIAGPEIERLIQLLAKVPGLGPRSARRAALHLIKKKEQLMEPLAVAMGEAVDKVRIC
STCGNVDTSDPCTMCTDPRRDDTTIIVVEDVSDLWALERAGAMNARYHVLGGTLSPLDGI
GPDDLNIRGLVNRVAAGGVSELILAVNATVEGQTTAHYITDQLEGMGVKVTRLAHGVPVG
GELDYLDEGTLSAALRSRTAF
NT seq 606 nt   +upstreamnt  +downstreamnt
atgtcgaaacgaatcgccggccccgagatcgaacgcctgatccagctgcttgccaaggtg
ccggggctcgggccacgatcggcgaggcgcgcggcgctgcatctcatcaagaagaaagag
cagctcatggagccgcttgcggtcgccatgggcgaggctgtcgacaaggtgcgcatctgc
tcgacctgcggcaacgtcgacaccagcgatccctgcacgatgtgcaccgacccgaggcgc
gacgacacgaccatcatcgtggtcgaggacgtgtcggacctctgggcgctggaacgggcc
ggcgccatgaacgcgcgctaccacgtgctcggcggcacgctctcgccgctggacgggatc
ggtccggacgacctcaacattcgcggcctcgtcaaccgggtcgcggcggggggcgtgagc
gagctgatcctggccgtcaatgccaccgtcgaaggccagacgaccgcgcactacatcacc
gaccagctcgagggtatgggcgtgaaggtgacgcggctcgcgcatggcgtgccggtgggc
ggcgaactggattatctggacgaagggacgctttcggcagcgctcaggtcgcggacggcg
ttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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