KEGG   Aquibium oceanicum: BSQ44_19085
Entry
BSQ44_19085       CDS       T04603                                 
Name
(GenBank) chaperonin GroL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
meso  Aquibium oceanicum
Pathway
meso03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:meso00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSQ44_19085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:meso03019]
    BSQ44_19085
   03110 Chaperones and folding catalysts [BR:meso03110]
    BSQ44_19085
   03029 Mitochondrial biogenesis [BR:meso03029]
    BSQ44_19085
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:meso04147]
    BSQ44_19085
Enzymes [BR:meso01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     BSQ44_19085
Messenger RNA biogenesis [BR:meso03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BSQ44_19085
Chaperones and folding catalysts [BR:meso03110]
 Heat shock proteins
  HSP60 / Chaperonin
   BSQ44_19085
Mitochondrial biogenesis [BR:meso03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    BSQ44_19085
Exosome [BR:meso04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   BSQ44_19085
  Exosomal proteins of other body fluids (saliva and urine)
   BSQ44_19085
  Exosomal proteins of breast cancer cells
   BSQ44_19085
  Exosomal proteins of colorectal cancer cells
   BSQ44_19085
  Exosomal proteins of bladder cancer cells
   BSQ44_19085
SSDB
Motif
Pfam: Cpn60_TCP1 EAD9
Other DBs
NCBI-ProteinID: APH73242
UniProt: A0A1L3SV90
Position
3907922..3909574
AA seq 550 aa
MAAKDVKFSRDARERMLRGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVQEGHKAVAAGMNPMDLKRGI
DLAVSEAVASLVQSAKKINTSSEVAQVGTISANGETEIGEMIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNPDKMVAELEDAYILLHEKKLSNLQAMLPVLEAV
VQTSKPLLIISEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEDLGIKLENVGLDMLGRAKKVSISKENTTIVDGAGKKEEIQGRVAQIKQQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALNATRAAVEEGIVPGGGVALL
RASLAIKGEGGNADQKAGIAIVRRALQAPARQIASNAGAEASIVAGKILENSGATYGYNA
QTGEYGDMIAMGIVDPVKVVRTALQDAASVAGLLVTTEAMIAESPKKESAGGMPGGMPGG
GMGGMGGMDF
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggctgccaaagacgtaaaattctcccgtgatgcccgcgagcgcatgctgcgcggcgtc
aacatcctcgccgacgcggtgaaggtgaccctcggccccaagggccgcaacgtggttctc
gacaagagcttcggcgctccgcgcatcaccaaggacggcgtcaccgtcgccaaggaaatc
gagctcgaggacaagttcgagaacatgggcgcccagatggtgcgcgaagtggcctccaag
accaacgacatcgccggtgacggcaccacgaccgcgaccgttctggcccaggcgatcgtt
caggaaggccacaaggccgttgccgccggcatgaacccgatggacctgaagcgcggcatc
gacctcgctgtttccgaagcggttgcaagcctcgtccagagcgccaagaagatcaacacc
tcctcggaagtcgcccaggtcggcaccatttcggccaatggcgagaccgagatcggcgag
atgatcgccgaggccatgcagaaggtcggcaacgagggtgtcatcaccgtcgaggaagcc
aagaccgccgagaccgagctcgaggttgtcgaaggcatgcagttcgaccgcggctacctg
tcgccctacttcgtgaccaacccggacaagatggtcgccgagctggaggacgcctacatc
ctcctgcacgaaaagaagctctccaacctccaggcgatgctgccggttctggaggcggtc
gttcagacctccaagccgctcctgatcatctccgaggacgtcgaaggcgaggctctggcc
acgctcgtcgtcaacaagctgcgcggtggcctcaagatcgccgccgtcaaggctccgggc
ttcggtgaccgccgcaaggccatgctcgaggacatcgcaatcctcaccggcggccaggtg
atttcggaagatctcggcatcaagctcgagaacgtcggcctcgacatgctcggccgcgcc
aagaaggtctcgatctccaaggagaacaccaccatcgtcgacggcgccggcaagaaggaa
gagatccagggccgcgtcgcccagatcaagcagcagatcgaggagaccacctcggactac
gaccgtgagaagctccaggagcgtctcgccaagctcgctggcggcgtcgcggtgatccgc
gtcggcggctccaccgaggtcgaggtcaaggagaagaaggaccgcgtcgacgacgccctc
aacgcgacccgcgcggccgtggaagaaggcatcgtgcccggcggcggcgtggcgctcctg
cgtgcttcgctggccatcaagggtgaaggcggcaacgccgaccagaaggccggtatcgcc
atcgtgcgccgtgctctccaggctccggctcgccagatcgcgtcgaacgcgggcgccgag
gcttcgatcgtcgccggcaagatccttgagaactccggcgcgacctacggctacaacgcc
cagaccggcgagtatggcgacatgatcgccatgggcatcgtggatccggtcaaggtggtt
cgcaccgccctccaggacgcggcctcggtcgccggcctgctcgtcaccaccgaagccatg
attgccgagtctccgaagaaggagagcgccggtggaatgcccggcggcatgcccggcggc
ggcatgggcggcatgggcggcatggacttctaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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