KEGG   Aquibium oceanicum: BSQ44_24935
Entry
BSQ44_24935       CDS       T04603                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
meso  Aquibium oceanicum
Pathway
meso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:meso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BSQ44_24935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meso03400]
    BSQ44_24935
Enzymes [BR:meso01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BSQ44_24935
DNA repair and recombination proteins [BR:meso03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BSQ44_24935
    RecFOR pathway proteins
     BSQ44_24935
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_22 AAA_3 AAA_14 AAA_16 Rad17 AAA_2 nSTAND3 AAA_18 AAA_17 RNA_helicase TsaE Sigma54_activ_2 AAA_28 AAA_33 AAA_24 NTPase_1 Bac_DnaA NB-ARC IstB_IS21 MCM Cytidylate_kin DUF815 AAA_7 ABC_tran NACHT PduV-EutP
Other DBs
NCBI-ProteinID: APH74248
UniProt: A0A1L3SXX7
Position
complement(5090292..5091329)
AA seq 345 aa
MTTAPRLITPEKRGEDVDVTLRPQSLDEFVGQAAARANLKVFVEAAKSRGEALDHVLFVG
PPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLSPAV
EEILYPAMEDFQLDLIIGEGPAARSVKIDLARFTLVAATTRLGLITNPLRDRFGIPVRLD
FYTVEELELIVRRGARILALPMSDDGALEIARRARGTPRIAGRLLRRVRDFASVAGAESV
TRTVADEALSRLEVDALGLDSLDRRYLSMILRNFGGGPVGIETIAAGLSEPRDAIEDIIE
PYLIQQGFIQRTPRGRVLTGNAWKHMGLVPPRNMAEVQGRLFEEE
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgaccaccgccccccgcctgatcacgccggaaaagcgcggcgaggacgtcgacgtcact
ctgcgcccgcagtcgctggacgagttcgtcggccaggcggcggcgcgcgccaacctcaag
gtcttcgtggaggccgcgaagtcgcgcggcgaggcgctcgatcacgtgctcttcgttggc
ccgccggggctgggcaagaccacgctggcacagatcatggccaaggaactcggggtgaac
ttccgttccacctccgggcccgtgatcgccaaggccggcgacctcgcggcgctcctgacc
aatctcgaggagcgcgacgtgctcttcatcgacgagatccaccggctttcccccgccgtg
gaggagatcctctatcctgccatggaggatttccagctcgacctgatcatcggcgaaggg
ccggcggcgcgttcggtcaagatcgacctcgcccgcttcaccttggtggccgccaccacc
cgcctcggcctgatcaccaatcctctgcgcgaccgcttcggcattccggtccggctcgat
ttctacacggtcgaggaactggaactcatcgtgcggcgcggcgcgcgcatcctggcgctg
ccgatgagcgacgacggcgcgctggagatcgcaaggcgcgcgcgcggcacgccgcgcatc
gccggccggctgctgcggcgcgttcgcgacttcgcctcggtggcgggcgccgagagcgtc
acccgcaccgtcgccgacgaggcgctgtcgcggctcgaagtcgacgcgctggggctcgac
agcctcgatcggcgctacctttccatgatcctgaggaatttcggcggcgggccggtgggg
atcgagaccatcgccgccggcctctcggagccgcgcgacgcgatcgaggacatcatcgag
ccctacctgatccagcagggcttcatccagcgcaccccgcgcggcagggtgctgaccggc
aacgcctggaagcacatgggtctcgtgccaccgcggaatatggccgaagtgcaagggcgg
ctgttcgaggaggagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (33)   
   Pfam (33)   
All databases (43)   

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