KEGG   Methylobacterium sp. 4-46: M446_2499
Entry
M446_2499         CDS       T00679                                 
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
met  Methylobacterium sp. 4-46
Pathway
met03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:met00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    M446_2499
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:met03400]
    M446_2499
DNA repair and recombination proteins [BR:met03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     M446_2499
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      M446_2499
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 DnaJ_CXXCXGXG AAA_25 RsgA_GTPase nSTAND1 APS_kinase AAA_21
Other DBs
NCBI-ProteinID: ACA16951
Position
complement(2767261..2770173)
AA seq 970 aa
MASLDTFFDRAAEGRVIAVRGAREHNLKNVDLVIPRDKLVVFTGLSGSGKSSLAFDTIYA
EGQRRYVESLSAYARQFLEMMAKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDY
MRLLWARAGIPYSPATGLPIESQTVSQMVDRVLALPEKTRAYLLAPVVRGRKGEYRKEIA
EFQQKGFQRLRVDGEYYPIDDVPRLDKKLKHDIDVVVDRIVVRPDMAARLADSFETALDL
ADGIAVIELADAPEGGAPERIVFSSRFACPVSGFTIPEIEPRLFSFNNPFGACPTCGGIG
HEMRIDPILVIADEALSLERGAIAPWAKSTSPYYGQTLEALARHYRFRTDVPWAKLTEAA
RQVVLFGSDGDPIRFSYNDGLRAYDVMKPFEGVVPNLERRYRETESDQAREDIARFMAET
PCQACGGKRLKPEALAVKVAMRDIAEVARLSVRDAHGWFTDLPAQLTPKQNEIAARILKE
IRDRLTFLVDVGLEYLTLARGSGSLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQR
DNERLLGTLKRLRDLGNSVIVVEHDEDAILQADYVVDVGPGAGIHGGQIVAKGTPQQLLA
DPNSLTAKYLTGELAVRMPAARRKIRKDRMLRLVGARGNNLKDVTAEFPLGTFTCVTGVS
GGGKSTLVIDTLYKAVARKLNGAVEHPAPFERIESLEFLDKVIDIDQSPIGRTPRSNPAT
YIGAFTPIRDWFAGLPEAKARGYQPGRFSFNVKGGRCEACSGDGVIKIEMHFLPDVYVTC
DVCKGKRYDRETLEVKYRERSIADVLDMTVEEAAELFKAVPAIRDKLETLARVGLGYVHV
GQQATTLSGGEAQRVKLSKELSKRATGRTLYILDEPTTGLHFHDVAKLMEVLHELVDQGN
TVVVIEHNLEVIKTADWVIDMGPEGGDGGGTIVAQGTPEAIARAKASHTGRFLREVLARR
PARPGKQAAE
NT seq 2913 nt   +upstreamnt  +downstreamnt
atggcttctctcgacacgtttttcgaccgtgcggcggagggccgcgtcatcgcggtgcgc
ggcgcccgcgagcacaacctcaagaacgtcgacctcgtcatcccgcgcgacaagctcgtc
gtcttcaccgggctgtcgggctcgggcaagtcctcgctcgccttcgacaccatctacgcc
gaggggcagcgccgctacgtcgagtcgctctcggcctatgcccgccagttcctggagatg
atggccaagcccgacgtcgaccagatcgacggcctgtcgcccgccatctcgatcgagcag
aagacgacctcgaagaacccgcgctcgacggtcggcaccgtgacggagatctacgactac
atgcgcctgctgtgggcgcgggccgggatcccctactcgcccgcgaccgggctgccgatc
gagagccagaccgtgtcgcagatggtcgaccgggtgctggccctgccggagaagacccgc
gcctacctgctggcgccggtggtgcgcgggcgcaagggcgagtaccgcaaggagatcgcc
gagttccagcagaagggcttccagcgcctgcgcgtcgacggcgaatactacccgatcgac
gacgtgccccggctcgacaagaagctcaagcacgacatcgacgtggtggtcgaccggatc
gtggtgcggcccgacatggccgcccgcctggccgattccttcgagacggcgctcgatctc
gcggacgggatcgcggtgatcgaactcgccgacgcgcccgagggcggcgcgccggagcgg
atcgtgttctcgtcgcgcttcgcctgcccggtctccggcttcaccatcccggagatcgag
ccgcggctgttctcgttcaacaacccgttcggcgcctgcccgacctgcggcggcatcggc
cacgagatgcgcatcgacccgatcttggtcatcgccgacgaggcgctgagcctggagcgc
ggcgccatcgcgccctgggcgaagtcgacctcgccctattacggccagaccctggaggcc
ctcgcccgccattaccggttccgcaccgacgtgccctgggcgaagctgacggaggcggcg
cggcaggtcgtgctgttcggctccgacggggacccgatccgcttctcctacaacgacggg
ctgcgcgcctacgacgtgatgaagcccttcgagggcgtggtgcccaacctggagcggcgc
taccgggagaccgagagcgatcaggcccgcgaggacatcgcccgcttcatggccgagacg
ccgtgccaggcctgcggcggcaagcgtctgaagcccgaggccctggccgtgaaggtggcg
atgcgcgacatcgccgaggtggcgcggctctcggtgcgcgacgcccacggctggttcacg
gacctcccggcgcagctcaccccgaagcagaacgagatcgccgcgcgcatcctcaaggag
atccgcgaccggctcaccttcctggtcgatgtcgggctcgaatacctgacgctcgcccgc
ggctcgggctcgctgtcgggcggcgagagccagcgcatccgcctcgcctcgcagatcggc
tcgggcctcacgggcgtgctctacgtgctcgacgagccctcgatcggcctgcaccagcgc
gacaacgagcgcctgctcggcaccctgaagcgcctgcgcgacctcggcaattcggtgatc
gtggtcgagcacgacgaggacgcgatcctgcaggccgactacgtcgtcgatgtcgggccg
ggggccggcatccatggcgggcagatcgtcgccaagggcacgccccagcagctcctcgcc
gacccgaattcgctcaccgccaagtacctgacgggggagctcgcggtgcggatgccggcg
gcccggcgcaagatccgcaaggaccgcatgctgcgcctcgtcggcgcgcgcggcaacaac
ctcaaggacgtgacggcggagtttcccctcggcaccttcacctgcgtgacgggcgtgtcg
gggggcggcaagtccaccctcgtcatcgacacgctctacaaggcggtggcgcgcaagctc
aacggcgcggtcgagcatccggcgcccttcgagcggatcgagagcctcgaattcctcgac
aaggtcatcgacatcgaccagtcgccgatcggccgcacgccgcgctccaacccggcgacc
tatatcggcgccttcacgccgatccgcgactggttcgccggcctgcccgaggccaaggcc
cgcggctaccagccggggcggttctcgttcaacgtcaagggcgggcgctgcgaggcctgc
tcgggcgacggcgtcatcaagatcgagatgcacttcctgccggacgtctacgtgacctgc
gacgtctgcaagggcaagcgctacgatcgcgagaccctggaggtgaagtaccgcgagcgc
tcgatcgcggacgtcctcgacatgaccgtcgaggaggcggcggagctgttcaaggccgtg
ccggcgatccgcgacaagctcgagaccctggcccgggtcgggctgggctacgtccatgtc
ggccagcaggcgaccaccctctcgggcggcgaggcgcagcgcgtgaagctctcgaaggag
ctctccaagcgcgccaccggccgcacgctctacatcctcgacgagccgaccaccggcctg
catttccacgacgtcgccaagctcatggaggtgctccacgagctcgtggaccagggcaac
acggtcgtggtcatcgagcacaacctggaggtgatcaagaccgccgactgggtgatcgac
atgggcccggagggcggcgacggcggcggcacgatcgtggcccagggcacgccggaggcg
atcgcgcgggcgaaggccagccataccggccgcttcctgcgcgaggtgctggcgcggcgc
cccgcccggccgggcaagcaggcggcggaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

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