KEGG   Methylobacterium sp. AMS5: Y590_04635
Entry
Y590_04635        CDS       T04283                                 
Name
(GenBank) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
meta  Methylobacterium sp. AMS5
Pathway
meta03420  Nucleotide excision repair
meta03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:meta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Y590_04635
   03430 Mismatch repair
    Y590_04635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meta03400]
    Y590_04635
Enzymes [BR:meta01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Y590_04635
DNA repair and recombination proteins [BR:meta03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Y590_04635
   MMR (mismatch excision repair)
    Other MMR factors
     Y590_04635
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 Peptidase_M78 AAA_30 UvrD_C_2 PDDEXK_1 AAA_11
Other DBs
NCBI-ProteinID: AMB44167
Position
941105..944461
AA seq 1118 aa
MDAWRGIRVIARRVHADAAARAVDGTASALVAAALELADLEVDTLEPGAVYGPEVVGVLE
RGDGFVRLAAGLDAGWRTVVTAHEIGHFHLHDERQSLVRTAEPGFGGQAFETGVERVVAY
SPRERRETQADVFAQEFLLPADLLRQRLVRDRQTPSQIAQEVGLPLPFVTMQAIRALLLP
PLPELDAIEEPPPAIPLDPDQRAAAEWDERPLILDAGPGTGKTRTLVGRIEYLLGIGVQP
WEILALTFSNKAAAEMRERVERLDAAAQMWIGTFHAFGLEILRLYAAQAGLRADFDVLDE
AHGLGLLEDILPDLKLRHFQNLWDPTLELRPILRAISRAKDEMVSPAAYLAAAEAALAAA
ETQEAVEAAEKAVEVGGVYTAYQEALDARGAVDFGDLVGKAARVLADHAGARATVRDRHR
WILVDEYQDVNAAGTALLDQIAVDGRRVWAVADPRQSIYRFRGAAPANAAGFASRYPNGQ
SRSLTTNYRSGEAVVKLFEHYGRDIAAAPKPPVEWHPHRGAVGYVDHLQAEDLRSEVYAV
RDQIERFKAEEIPYDRQAILARTHLCLARFGRLLQEFDVPILYLGDLFERPEIRDLLSVV
SLGADADAAGLIRVAQLPEYGATRADALVAIREADAAREDIVAVCARAEAIVGFTDAGRA
GLIRLAGQLTGVNRGTTAWRMLVGYLFEGSGYLRRFVEDPSVRSQQCLVAIYQLLKFARE
HSDATGGRGGRRAFLERIRRIERLDDDRAFRVVPPEADGIPAVRMMTVHAAKGLEFAAVH
LPQVATRYVPGKRQSVRCPAPPGMEHLAIGPTDHDAEEECLFFVALSRARDVLSITSAKR
YTAKATCNPSKYLKGLGARLPKPRPAPTVAPGTRPVEVVAVVPVDAHDGRDLLIWTKCPA
RYRYEVLDDLGDRSAAGAYLAFRRCVRATIDWISTQQAGGEAVDPAAARQRLTEVWAERG
PVDHGFEPVYRAAAETMVENAVALLDDGGRAVDRRWHAATAGGTIGVRADRVVERPDGSI
IAQVYRTGRKSKSEAQKAIWELLGEALRQAHPDRTVRLQAVYPATPEAVDIDPDQGGAGL
AAYADAIAGIEAGRFPPTPSGDCPTCRFYFVCTAEDSF
NT seq 3357 nt   +upstreamnt  +downstreamnt
gtggatgcttggcgcggcatccgggttatcgcccggcgcgtgcacgccgacgccgccgcg
cgcgcggtcgatgggacggcgtcggcgcttgtcgcggcggcgctcgaactggccgacctt
gaggtcgatacgctcgaacccggggccgtgtacggccccgaggtggtcggcgtccttgag
cggggcgacgggttcgtccgcctcgccgctggcctcgacgcgggatggcgcaccgtcgtc
accgcgcacgagatcgggcacttccacctgcacgacgagcgccaatccctcgtgcgtaca
gccgagcccggtttcggcggccaggcattcgagaccggggtagagcgggttgtcgcctac
tcgccgcgcgagcggcgcgagacacaggccgacgtattcgcgcaggagttcctgctgccg
gccgacctgctgcgccagcgcttggtgcgtgatcgccagacgccctcgcagatcgcgcag
gaggtcgggcttccactgccgttcgtgacgatgcaggcgatccgggcactgcttctgccc
ccgctgcctgaactggacgcgatcgaggagccgccgccggcgatcccgcttgacccggac
cagcgggccgccgcggaatgggacgagcggccgctcattctcgacgctgggccgggcacc
ggtaagacgcgcacgctcgtggggcggatcgagtacctcctcggtatcggcgttcagccg
tgggagatcctcgcgctcaccttctcgaacaaggcggccgcggagatgcgcgagcgggtc
gagcgcctcgacgcggccgcgcagatgtggatcggcaccttccacgcgttcggcctggag
atcctgcgcctgtacgcggcgcaggctgggctgcgcgccgacttcgacgtcctcgacgag
gcgcatgggcttggcctgctcgaagatatactgccggacctcaagctccggcattttcag
aatctgtgggacccgacgctcgagctgcgcccgatcctccgggcgatctcgcgcgcgaag
gacgagatggtcagcccagccgcgtaccttgcggcggccgaggcggcgctggccgcggcc
gagacgcaggaggccgtcgaggcggccgagaaggcggtcgaggtcggcggcgtctacacg
gcgtaccaagaggcgctcgatgccaggggcgcggtcgattttggcgacctcgttggcaaa
gcggccagggtcctcgccgaccatgcaggggcgagggccaccgtgcgggaccgccaccgg
tggatcctcgtggacgagtaccaggacgtgaacgcggccggcaccgcgctgctggaccag
atcgcggtcgacgggcggcgcgtctgggccgtggccgacccgcggcagtcgatctaccgg
ttccgcggcgcggccccagccaacgcggccggcttcgcgtcccgctacccgaacgggcag
agccgttcgctcaccacgaactaccgctcgggcgaggcggtggtgaagctgttcgaacac
tacgggcgtgacatcgccgcggcccccaagccaccggtcgaatggcatccccaccggggg
gcggtggggtacgtcgaccatctgcaggccgaggatctgcgctcggaagtctacgcggtg
cgcgaccagatcgaacggttcaaggccgaggaaatcccctacgaccggcaggccatcctc
gcgcggacccacctgtgcctcgcccggttcggccggctgctccaggagttcgacgtcccg
atcctctacctcggcgacctgttcgagcggccggagatccgggacctgctctccgtcgtg
tcgctcggggccgacgcggacgcggccgggctgatccgcgtggcgcagctgccggagtat
ggtgcgacgcgcgcggacgcgctcgtagcgatccgggaggcggacgccgcgcgcgaggat
atcgtcgcggtgtgcgcgcgggccgaggcgatcgtggggttcacggatgcggggcgcgcg
ggcctgattcggctggccggtcagctcaccggggtcaaccggggtacgacggcctggcgt
atgcttgtgggctacctgttcgagggtagcggctatctccggcgcttcgtcgaagacccg
agcgtccggtcacagcagtgcctcgtcgcgatctaccagctgctcaagttcgcccgcgag
cactccgacgccaccggcgggcggggcgggcggcgcgcgttcttggagcggatccgccgc
atcgagcgcctcgacgacgatcgcgcgttccgcgtcgtgccgccggaggccgacggaatc
cccgcggtgcgcatgatgaccgtgcacgcggccaagggcttggagttcgcggccgtgcac
ctgcctcaggtggccacgcgctacgtgccgggcaaacgccagagtgtgcgctgccccgcc
ccgcccggaatggagcatctcgcgattggtccgactgaccacgacgccgaagaggagtgc
ctcttcttcgtcgccctgtcgcgggcgcgggacgtcctctcgattaccagcgccaagcgc
tatacggcgaaggcgacctgcaacccgtcgaagtaccttaagggcctcggggcgcggctg
ccgaagccccggcccgcgccgacggtcgccccggggacgcggcccgtcgaggttgtggcc
gtcgtacccgtggacgcccacgacgggcgcgacctgctgatctggacgaagtgcccggcg
cgctaccgctacgaggtgctggatgacctcggcgaccggagcgcagccggagcctacctc
gcgttccgccggtgcgtgcgggcgaccatcgactggatctccacccagcaagccgggggc
gaggccgtggatccggccgcggctcgccagcgcctcaccgaggtctgggccgagcgcggg
cccgtcgatcacgggttcgagccggtctaccgcgccgctgccgagaccatggtcgagaac
gccgtcgcgctgctcgacgacggcggtcgggccgtagaccgacggtggcacgccgccacc
gcaggcggcacgatcggcgtgcgcgcggaccgcgtcgtggaacgcccagacgggagcatc
atagcgcaggtctaccggacgggacgcaagtcgaagagcgaggcgcagaaagcgatctgg
gagctcctgggcgaggcactccgtcaggctcaccccgaccgcacggtcaggctgcaggcg
gtctacccggccacccccgaggcggtggacatcgacccggaccagggcggcgcgggcctc
gccgcgtacgccgatgccatcgccgggatcgaggccggtcgcttcccgccgaccccatcg
ggggactgtcccacctgccggttctacttcgtctgcaccgccgaagattctttttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (41)   

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