KEGG T05461: C0214

Methylobacterium sp. DM1: C0214_09935

Entry

C0214_09935       CDS       T05461

Name

(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE

K03650

tRNA modification GTPase [EC:3.6.-.-]

Organism

metd Methylobacterium sp. DM1

Brite

KEGG Orthology (KO) [BR:metd00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:metd03016]
    C0214_09935
Transfer RNA biogenesis [BR:metd03016]
Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    C0214_09935
Prokaryotic type
   Methyltransferases
    C0214_09935

SSDB

Motif

Pfam:

MnmE_helical TrmE_N MMR_HSR1 FeoB_N Dynamin_N HflX_C AAA_28 RsgA_GTPase ABC_tran AAA_29 AAA_18

Other DBs

NCBI-ProteinID:

AWI88542

Position

complement(2095668..2096999)

AA seq 443 aa
MTDALPDRGGTIFAPASGIGRAAVAVVRISGPAAGAALDLLAGGRPEPRRLALRRLRDPD
TRTVLDQALVAWLPGPTTATGEDMAELHLHGGLAVRAAVLRALASVPGCRPAEAGAFSRR
AFLNGRIDLTEAEGIADLIDAETEAQRLQALRQLEGALGRQVATWRETGIELLAGAEAAL
DFADEGDVDADDLDAALSGRAAGLRDAIQGALADGRRGERLREGFCVVLAGAPNAGKSTL
LNALSGRDAAIVSDIPGTTRDAIEVRCDLGGLPVILVDTAGLRATEDAIEAEGVKRTHHR
IRSADLVLHLVPADAPSVADGLGDIPTLRVRTKSDLAPRAGEGTLAVSAITGAGLDALLD
AVQAAAAASISQGDALVTRERHRAALTRAAGHLDRVATAPAGFPPELIAEDLRLAVRALG
EVGGHVGVEEMLDRLFSGFCIGK

NT seq 1332 nt +upstreamnt +downstreamnt
atgaccgatgccctccccgatcgcggcggcaccatcttcgccccagcgagcggcatcggc
cgcgcggcggtggcggtggtgcggatcagcgggccagcggcgggagcagcgctcgacctc
ctagctggagggcgtccggagccgcgccgactcgccttgcgccgcctgcgcgatcccgac
actcgcaccgtcctcgatcaagcgctcgtcgcgtggcttcccggccccaccaccgcgacc
ggcgaggacatggccgaactgcacctccatggcggtctggccgtgagggccgcggtgctg
cgggcactcgcctccgtgccgggctgccggccggcagaggccggggcgttcagccgccgc
gccttcctcaacggccgcatcgatctcaccgaggcggaaggcatcgccgacctcatcgac
gccgagaccgaggcacagcgcctccaggccctgcggcagctcgaaggcgccctcggccgt
caggttgcgacctggcgcgaaaccggcatcgaattgctcgccggcgccgaggcggccctc
gacttcgccgatgagggcgacgtggacgccgacgatctcgacgccgccctctccggccgc
gccgccggcctgcgcgacgcgattcagggcgctctcgccgacgggcgccgaggcgagcgc
ctgcgcgagggcttctgcgtcgtgctggccggtgcccccaacgccggaaaatcgaccctg
ctcaacgctctgagcgggcgcgacgcggccatcgtctcggacattcccggcacaacccgc
gatgccatcgaggtgcggtgcgatctcggcggcctgccggtgatcctggtcgatacggcg
ggcctgcgcgcgacggaggatgcgatcgaggccgagggcgtgaagcgcacgcatcaccgc
atccggagcgccgacctcgtgcttcacctcgtgccggccgatgcaccgtccgtcgccgat
ggtctcggggatattccgacccttcgcgtccgcaccaagagcgacctcgcgcctagagcg
ggggagggcaccctcgccgtctccgccatcacgggcgccggcctcgacgcgctgctcgat
gcggtgcaggccgcggcagccgcctcaatcagccagggcgatgcgctcgtcacccgcgag
cgccatcgcgcggctctgacccgcgcggccggtcatctcgaccgtgtcgccaccgcgccg
gccggctttccgccggagctgatcgcggaggatctgcggctcgccgtccgggcactgggt
gaggtcggcggtcatgtcggagtcgaggagatgctggaccgcctcttctccggcttctgt
atcggcaagtag

All links

Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (26)   

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