KEGG T05461: C0214

Methylobacterium sp. DM1: C0214_25120

Entry

C0214_25120       CDS       T05461

Name

(GenBank) DNA gyrase subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

metd Methylobacterium sp. DM1

Brite

KEGG Orthology (KO) [BR:metd00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:metd03032]
    C0214_25120
   03400 DNA repair and recombination proteins [BR:metd03400]
    C0214_25120
Enzymes [BR:metd01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     C0214_25120
DNA replication proteins [BR:metd03032]
Prokaryotic type
  DNA Topoisomerases
   C0214_25120
DNA repair and recombination proteins [BR:metd03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      C0214_25120

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C

Other DBs

NCBI-ProteinID:

AWI91191

Position

5319112..5321838

AA seq 908 aa
MADDKDAPGAGTPPPATDIKPVSITDEMRRSYLDYAMSVIVSRALPDARDGLKPVHRRIL
YSAFESGHLPERKYVKSARIVGDVIGKYHPHGDQSIYDALVRMAQDFSMRLMLIDGQGNF
GSVDGDPAAAMRYTESRLAKPAVALLTDIDKNTVDFRPNYDEAHEEPTVLPARFPNLLVN
GAGGIAVGMATNIPPHNLGELVDACVALIDDPALTIEALNEIVPGPDFPTGGMILGRAGT
RQAYTTGRGSIIMRARSHVEELRKEREALIFTEIPYQVNKATLIEKIAELVKDKRIEGIS
DLRDESDRDGMRIVVEIKRDAMADVVLNQLYRYTPLQTSFGANMVALNGGRPELMNLKDL
LLAFNDFREEVVSRRTKFLLNKARERAHVLCGLAIAVANIDEVIRLIRTSPDPNTARELL
MARDWPAHDIAPLIALVDDPRHRVADDGTYRLSETQARAILDLRLQRLTALGRDEIGDEL
KKLADEIADYLDILRSRARIQAIVKDELAEVRELFATPRKTEIIDSDFSVEDEDLIARED
MVVTVSHAGYVKRVPLSTYRAQKRGGKGRSGMSTRDEDFVTRLFVANTHTPVLFFSDQGQ
AYKEKVWRLPVAAPNARGKALVNILHLQNEGERITTIMPLPEDEASWETLDVMFATASGN
VRRNKLSDFVQVNRNGKIAMKLDPGDHIVHVEICRADQNVLLTTALGQCIRFPVEDVRVF
KGRDSTGVRGISLAKDDRVISMAILNAFDASPEERAGYLKMRRAVIGDAGDEGDAAEAEE
STAEAAISQERYSEMGAAEQYVLTLSERGFGKRSSSYEYRTSGRGGKGITAMRVNARNGH
LVASFPVEASDQIMLVTNAGQLIRVPVDDIRIVGRASQGVTVFNTDKAERVVSVEHIEGE
EENGEDEA

NT seq 2727 nt +upstreamnt +downstreamnt
ttggcagacgacaaggacgcccccggcgccggcacgcccccgccggcgaccgacatcaag
cccgtctccatcaccgacgagatgcgccgctcctatctcgattacgccatgagcgtgatc
gtgagccgggcgctgcccgatgcccgcgacggcctcaagcccgtgcatcggcgcatcctc
tactcggccttcgagtcggggcacctgccggagcgcaaatacgtcaagtcggcccgcatc
gtcggcgacgtgatcggtaagtaccacccccacggcgaccaatcgatctacgacgccttg
gtccgcatggcgcaggacttctcgatgcgcctgatgctcatcgatgggcagggcaatttc
ggctcggtcgacggcgatcccgccgcggccatgcgctacaccgaatcgaggctcgccaag
ccggccgtcgcgctgctgaccgacatcgacaagaacaccgtcgatttccgacccaactac
gacgaggcccacgaggagccgacggtcctccccgcgcgcttccccaacctgctggtcaac
ggcgcgggcggcatcgcggtgggcatggccaccaacatcccgccgcacaatctcggcgaa
ctggtcgatgcctgcgtggcgctgatcgacgatccggccctcaccatcgaggcgctcaac
gagatcgtgcccggccccgacttccccaccggcggcatgatcctggggcgcgccggaacg
cggcaggcctacaccaccggccgcggctcgatcatcatgcgcgcccgctcgcatgtggag
gaactgcggaaagagcgcgaggcgctgatcttcaccgagatcccgtatcaggtgaacaag
gcgacgctgatcgagaagatcgccgagctggtcaaggacaagcgcatcgagggcatctcg
gacctgcgcgacgaatccgaccgcgacggcatgcgcatcgtcgtcgagatcaagcgcgac
gccatggccgacgtcgttctgaaccagctctaccgctacaccccgctccagacctcgttc
ggcgccaacatggtggcgttgaacggcggccggccggagctgatgaacctgaaggacctg
ctcctggccttcaacgacttccgcgaggaggtcgtctcccggcgcaccaagttcctgctg
aacaaggcgcgcgagcgcgcccacgtcttgtgcggtctggcgattgcggtcgctaacatc
gacgaggtgatccgcctgatccgcacctcgccggacccgaacaccgcccgcgagctcttg
atggcccgcgactggccggcgcacgacatcgccccgctgatcgcgctggtggacgatccg
cgccaccgggtcgccgatgacggcacctatcgcctgtccgaaacacaagcccgcgccatc
ctcgatctgcgcctgcagcgcctcaccgccctcgggcgcgacgagatcggcgacgagctg
aagaagcttgccgacgagatcgccgactacctcgacatcctgcgctcgcgcgcccgcatc
caggccatcgtcaaggacgagctcgccgaggtgcgcgaactcttcgccaccccgcgcaag
accgagatcatcgattccgacttcagcgtcgaggacgaggatctgatcgcccgcgaggac
atggtcgtgaccgtgtcgcacgccggctacgtcaagcgcgtgccgctctcgacctaccgg
gcgcagaagcgcggcggcaagggccgctccggcatgagcacccgcgacgaggatttcgtc
acgcggctgttcgtggccaacacccacacgccggtcttgttcttctccgaccagggtcaa
gcctacaaggagaaggtctggcgcctgccggtggccgcgccgaacgcgcggggcaaggcg
ctcgtcaacatcctgcacctgcagaacgagggcgagcgcatcaccaccatcatgccgctg
cccgaggacgaggcgtcctgggagacgctcgacgtgatgttcgccaccgcctccggcaat
gtccgccgcaacaagctgtcggacttcgtccaggtcaaccgcaacggcaagatcgcgatg
aagctcgatccgggcgatcatatcgtccatgtcgagatctgccgcgccgaccagaacgtg
ctgctcaccacggcactcggccagtgcatccgcttccccgtcgaggatgtgcgcgtgttc
aagggccgcgactcgaccggcgtgcgcggcatctcgctggccaaggacgaccgcgtcatc
tcgatggcgatcctcaatgccttcgatgcctcgcccgaggagcgggccggctacctgaag
atgcgccgcgccgtgatcggcgatgccggcgacgagggggatgcggcggaggccgaggag
agcacggcggaagccgcgatctctcaggagcgctatagcgagatgggcgctgccgagcag
tacgtgctgacgctatccgagcgcggtttcggcaagcgctcctcctcctacgagtaccgc
acctccggccgcggcggcaaaggcatcacggcgatgcgggtcaacgcccgcaacggccac
ctcgtcgcctccttccccgtcgaagcgtccgaccagatcatgctcgtcaccaatgccggc
cagctcatccgcgtgccggtggacgacatccgcatcgtcggccgcgcctcgcagggcgtg
acggtgttcaacaccgacaaggccgagcgcgtcgtctcggtggagcacatcgaaggcgag
gaggagaacggcgaggacgaggcctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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