KEGG   Methanobacterium sp. MB1: MBMB1_2022
Entry
MBMB1_2022        CDS       T02957                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
meth  Methanobacterium sp. MB1
Pathway
meth00300  Lysine biosynthesis
meth00470  D-Amino acid metabolism
meth01100  Metabolic pathways
meth01110  Biosynthesis of secondary metabolites
meth01120  Microbial metabolism in diverse environments
meth01230  Biosynthesis of amino acids
Module
meth_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:meth00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    MBMB1_2022 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    MBMB1_2022 (dapF)
Enzymes [BR:meth01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     MBMB1_2022 (dapF)
SSDB
Motif
Pfam: DAP_epimerase Pro_racemase Gyro_capsid
Other DBs
NCBI-ProteinID: CDG66096
UniProt: U6ED18
Position
1972488..1973360
AA seq 290 aa
MSERKILLFHKMHGLGNDYVVIDESVEEIIPEEKKGEISAELCTRGFSVGADGVIFVVKS
TEEDIRFRIFNSDGSEAEMCGNGIRCFAKYVYENDVLKQKQMRVETLGGTKELTLQVENG
TVKSIRVDMGTATFKTREVPMNSDKEEFIDEELLVEGEPLKLTAVNVGNPHAIVFTDNLE
EVELDHMGPLLENHDAFPERTNVHFVRVLSPQEVEMLTWERGAGFTMACGTGATGTVISG
YKLGLLDKDVLVHLPGGDLKITVYEKDGNLGAFMEGDAVSVFEGIMEIEI
NT seq 873 nt   +upstreamnt  +downstreamnt
atgagtgagagaaaaattttattatttcataaaatgcacggattaggtaacgattatgtg
gtgattgatgaatctgttgaagaaataattcccgaagagaagaaaggtgaaatttcagca
gaactgtgcaccagaggattctcagtaggggcagacggagttatatttgtggttaaatcc
actgaagaagatataagattccgtatttttaacagtgacggtagtgaagcagaaatgtgt
ggtaatgggatccgttgctttgctaaatacgtttatgaaaatgatgtcctgaaacagaaa
caaatgagagtggaaaccttaggtggaaccaaagaattaacactacaagttgaaaatggt
acggtgaaatctatacgtgtagatatggggactgccaccttcaaaacaagggaagtgcca
atgaatagtgataaagaagaatttattgacgaagagttactagttgaaggtgaaccttta
aagctcaccgcagtcaatgtcgggaacccccatgctattgtattcaccgataacttggaa
gaagtagaactggaccatatgggtcctctgctggagaatcatgatgcatttcctgaaagg
accaatgtacactttgtaagagtgttaagtccacaagaagtggaaatgctaacttgggaa
agaggtgctggtttcaccatggcttgcggtactggagccacaggtacagttatttccgga
tacaaactaggcttactggataaggatgtcctggttcatctacctggaggagacctgaag
attactgtatatgaaaaagacggtaatctgggtgccttcatggaaggagatgcggttagt
gtctttgagggtataatggaaatagaaatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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