KEGG   Methanothermobacter sp. KEPCO-1: FVF72_06560
Entry
FVF72_06560       CDS       T06317                                 
Name
(GenBank) TIM barrel protein
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
metk  Methanothermobacter sp. KEPCO-1
Pathway
metk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:metk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FVF72_06560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:metk03400]
    FVF72_06560
Enzymes [BR:metk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     FVF72_06560
DNA repair and recombination proteins [BR:metk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     FVF72_06560
SSDB
Motif
Pfam: AP_endonuc_2 UvdE
Other DBs
NCBI-ProteinID: QEF94839
UniProt: A0A5B9M547
Position
complement(1227434..1228261)
AA seq 275 aa
MIRVGPAGNPVGYRGSTVSVFKKIRAMGLDAYEYQATYGLRLKKENALKIGENSRKNDIL
VSMHGPYYINLSSAKEETIEKSIHRLFDCAVAGEWMGAYRIVFHPGFYGDLGRRRAFELC
RKSIGELISRLESAGIRDFTLAPETTGKRSQVGSLEEIIRFSEEFDNVMPTVDFAHIHAR
GGGCIGGASDYRRILAEIEGRLGVEHLHCHFTGIEYTDAGERKHHTLSEGFGPPVEPLLE
VLVDGGWDATIISETPRKDEDARRIKDLLEGYLSR
NT seq 828 nt   +upstreamnt  +downstreamnt
ttgataagggttggtcctgcagggaaccccgtgggttaccgtggcagtacagtcagtgtt
ttcaaaaagatcagggccatgggacttgacgcctatgagtaccaggcaacctatggcctc
aggttaaagaaggaaaacgcccttaagattggtgaaaattcaaggaagaatgatatactt
gtctcaatgcacggcccctactatataaacctttcatcagccaaggaggagaccatagag
aaatcaatccaccggctctttgactgtgcggttgcaggggagtggatgggggcctaccgt
attgtattccaccccggcttttacggtgaccttgggaggagaagggcatttgagctctgc
aggaagtctattggggaactgatctcaagacttgaaagtgccggtatcagggacttcaca
cttgcacctgagaccaccggtaagaggtcacaggtggggagtctagaggagattataaga
ttctcagaggaatttgataacgtcatgcccaccgtggactttgcacacatacatgcaagg
ggtggggggtgcatagggggcgccagtgattacaggaggatacttgcggagattgaggga
agattaggagtggagcacctccactgccacttcacagggatagagtacacagatgcggga
gagagaaagcatcacacactatccgaaggctttggccctcctgttgagcccctccttgag
gtgctggttgatgggggctgggatgccaccataatctccgagacaccccgaaaggatgag
gatgcaaggaggataaaggacctccttgaggggtacctcagcaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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