KEGG   Methylomonas sp. LW13: U737_18610
Entry
U737_18610        CDS       T05879                                 
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
metl  Methylomonas sp. LW13
Pathway
metl00550  Peptidoglycan biosynthesis
metl01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:metl00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    U737_18610
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:metl01002]
    U737_18610
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:metl01011]
    U737_18610
Enzymes [BR:metl01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     U737_18610
Peptidases and inhibitors [BR:metl01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   U737_18610
Peptidoglycan biosynthesis and degradation proteins [BR:metl01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   U737_18610
SSDB
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2 Beta-lactamase Peptidase_S13 Transpeptidase
Other DBs
NCBI-ProteinID: QBC28755
Position
4106491..4107654
AA seq 387 aa
MSQPYRRTLSLFSGLLLLLTAFSLQAASPIFTPAAPSVAASSYFLMDFDSGRVLAEKDAD
KRVSPASLTKIMTAYVVFRELKAGHLTLDEKVTISQNAWETGGSKMFVEVNKQVAVEDLL
QGMIIQSGNDASVALAEHVAGSEQTFATMMNEQASRLGMANSNFENATGLPSPNHYSSAH
DLATLARAVIKEFPEYYRWDKQKEFTYNGITQQNRNLLLWRDPSVDGLKTGFTDDAGYCM
VASAKREDMRLISVVMGTASAGARSNESQSLLNYGFRFFETHRLYEGNKPLGDARVRKGV
TSKVAVGLPEDLYVTAPRKHFNELKAETQIDKGVFAPLNKGDTVGNLNISLAGESILSKP
LVALDAVAEGGIFRRLYDAAIGLLEKE
NT seq 1164 nt   +upstreamnt  +downstreamnt
atgagccaaccttaccgtaggacactcagcctgtttagcgggctgctgttattgttaacc
gccttctcgctgcaagccgccagcccgattttcacccccgccgctcccagcgtcgcggcc
tccagttactttttgatggacttcgacagcggccgggtattggccgaaaaagacgccgac
aagcgcgtatctcccgccagcttgaccaaaatcatgaccgcctacgtggtgttccgcgag
ctgaaagctgggcatttgacgctggacgagaaagtcacgatcagccagaacgcctgggaa
accggcggctcaaaaatgttcgttgaggtaaacaaacaagtggcagtcgaagacttgttg
caaggcatgatcattcaatcgggcaacgatgccagcgtcgccttggctgaacacgtcgcc
ggtagcgaacaaaccttcgcgacgatgatgaacgaacaagccagccgcttgggcatggcc
aacagcaatttcgaaaacgccaccggcctgcccagccccaaccattacagctcggcacat
gacctggcgaccttagcccgcgcggtgatcaaagagttcccggaatactatcgctgggac
aagcaaaaagaatttacctacaacggcatcacccaacaaaaccgcaacctgttgctgtgg
cgcgatccttccgttgacggtttgaaaaccggttttaccgacgatgccggctattgcatg
gtggcttccgccaaacgcgaagatatgcgtttgatttcggtggtcatgggtacagccagc
gccggcgcgcgttccaacgagagccaatcgctgctgaattacggtttccgcttcttcgaa
acccatcgtctgtacgaaggcaataaacccttgggcgacgcgcgggttagaaaaggcgta
acctccaaagtcgcggttggtttgccggaagacctgtacgtcaccgccccacgtaaacac
tttaacgagttaaaagccgaaacgcagatcgacaaaggcgtattcgcgccgctgaacaag
ggcgacacggtcggcaacctgaacatttcgttggccggcgaatccatcctcagcaaaccg
ctggtggctttggatgctgtcgccgagggcggcattttccgccgtctctacgacgcagcc
attggcttactggaaaaagaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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