KEGG   Methanobacterium sp. MZ-A1: BK008_01515
Entry
BK008_01515       CDS       T05317                                 
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
metn  Methanobacterium sp. MZ-A1
Brite
KEGG Orthology (KO) [BR:metn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:metn03009]
    BK008_01515
Ribosome biogenesis [BR:metn03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    BK008_01515
SSDB
Motif
Pfam: ABC_tran RLI AAA_21 SMC_N Fer4 AAA nSTAND3 RsgA_GTPase Rad17 AAA_22 Fer4_7 NB-ARC VapE-like_dom AAA_14 Fer4_21 AAA_24 Fer4_6 Fer4_10 AAA_16 Fer4_2 AAA_23 AAA_18 Fer4_9 DUF359 AAA_29 MMR_HSR1 PhoH AAA_13 KAP_NTPase Fer4_16 Fer4_3
Other DBs
NCBI-ProteinID: AUB57127
UniProt: A0A2H4VGC3
Position
299108..300883
AA seq 591 aa
MTRISILDHDRCQPKKCNYMCIEYCPGVRMEEDTITIDPKTKKPIMSEELCSGCGICTNR
CPFNAISIINLPEALEDPIHRYGQNQFELFGLPTIKDGSVVGLLGPNGIGKSTIIRILSG
ELKPNLGNFEEETSWDDITNFFKGNQLQNYFQKLSEGDLKVVHKPQMVDLLPKVVKGKVD
DLLNSVDQRNRLDFVTSSLQLETIMEREIANLSGGELQRVAIAAAVLRDADFYYFDEPTS
WLDVRQRLYAINVIRELAEEGKSVLVIEHDLAALDAISDYIHILYGQPGGYGVVSHMRGV
RVGINAYINGFLREENVRFRKQPIEFHVRPPATEVEAEALSEYSSLEKSYDGFHLNVDEG
LVQHDEILTAFGPNGIGKTTFAKMLAGVEKPDEGKIKKKVKISYKPQYLVSEYSGTVQEF
LYTTAPNYGTNLFKTEIMRPFLLEELLEKKMDELSGGELQRLSVAISLSQEADIYLFDEP
TAYMDVEQRLRAAKAIRRVTESRNAAAIIVDHDIVFIDYISSRAMVFTGEPGVEGHATSP
MDLRSAMNKFLSEVGITFRRDKETRRPRVNKLDSYLDREQKEKGEYYYLKS
NT seq 1776 nt   +upstreamnt  +downstreamnt
ttgactagaatatccatattagaccatgaccgctgccagcccaaaaaatgcaactacatg
tgtattgagtactgtcccggcgtgcgcatggaagaagacaccatcacaatcgaccctaag
accaaaaaaccaataatgtccgaggaactgtgttctggttgtggaatatgcaccaatcgc
tgtccattcaatgcaattagcatcataaacctaccagaagccctggaagatcctattcac
cgttacgggcaaaatcagttcgagttattcggcttacccactataaaggatggttcagtg
gtaggacttttgggacccaatggtatcggtaaatcaaccatcatacgcatcctttccgga
gaactaaaacccaaccttggaaactttgaagaagaaacaagttgggatgatataaccaac
ttctttaagggtaatcagctccagaattatttccaaaaactctccgagggtgacttgaag
gtagtgcacaagccccagatggtggatttactccctaaagtggtgaagggcaaggtggat
gatctccttaacagcgtggaccagaggaatcgtctggactttgtcaccagctccctgcaa
ctggaaaccataatggaaagggaaatagccaacttgagtggtggtgaacttcaaagggtg
gccatcgccgctgcagttcttcgtgatgctgatttctattacttcgacgaacccaccagc
tggttggatgtccggcagcgtctttatgccattaacgttatccgggaactggctgaagag
ggaaaatccgtcctggtaatagaacacgatctggcagccctggatgccatctccgactat
atccacatcctctatggtcagcccgggggttacggtgttgtttcgcacatgcgcggggtt
cgtgtggggataaatgcctatatcaatggttttctccgggaagagaatgtacgcttccgg
aaacagcccattgaattccatgtacgaccacccgccacagaagtggaggcagaggcctta
tctgagtacagcagcctggagaagtcctacgatggattccacctgaatgtggatgaaggt
ctggtgcagcatgatgaaatcctcactgccttcggacccaatggtattggtaaaaccacc
tttgccaagatgctggctggagtggagaaaccagatgaagggaagattaagaaaaaggtt
aaaatcagttataaaccccaatatctggtatcagagtatagtggaactgttcaggagttc
ctgtacaccacagctccgaactacggtaccaacctcttcaaaaccgagatcatgaggccc
ttcctcctggaagaattattggagaagaagatggatgagttgagtggtggtgaactccag
agattatcagtggccatttcactgtcacaggaagctgatatataccttttcgacgaaccc
accgcttacatggatgttgaacaacgtcttagggctgccaaggccattcgccgagttacc
gaaagtcgtaacgctgcagccataattgtggatcacgatatagtgttcattgattacatt
tccagtcgggccatggtcttcaccggtgaacctggagtggaagggcatgccaccagtccc
atggacttgcgttcagctatgaacaagtttctctcggaggtgggaatcaccttccgccgg
gataaagaaaccagaagaccacgggttaacaagctggacagttacctggaccgggaacag
aaggaaaaaggggaatattattatctgaaaagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (31)   
   Pfam (31)   
All databases (38)   

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