KEGG   Methanobacterium sp. MZ-A1: BK008_05740
Entry
BK008_05740       CDS       T05317                                 
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
metn  Methanobacterium sp. MZ-A1
Brite
KEGG Orthology (KO) [BR:metn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:metn03016]
    BK008_05740
Enzymes [BR:metn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     BK008_05740
Transfer RNA biogenesis [BR:metn03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BK008_05740
 Prokaryotic type
    BK008_05740
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AUB57863
UniProt: A0A2H4VIC9
Position
1167818..1169071
AA seq 417 aa
MLNAETYLTPQKGIGGQIRTKNEDFYVEEIPESNPSGEGPNTWLWIEKNSRTTLDVLLDI
ARELKINRKQMGFAGMKDKKAVTRQWICVSNKTPEELQGLGEKLHNVKIIDIIPNQKKLR
MGQLVGNKFRLMVRDVEDPGAAAQEAQEILNQLKERGVPNYYGYQRFGKDRPNTHLVGKA
LIMGGVKEAVDRYIGHPYDTEPKHIQEARRFYDEGELEESLESMPSGMRYEKMMLRALIK
EMKKRGELTEKSYILALRSIPKPLSRMLVHAYQSYLFNRAVSERTKLGIDQYVKGDILID
NEEHLIHEFSEEEIDNEIKNFQAHPSSPLYGSKVPLAGGKLGEMEQKILDEEKLKLEDFT
VPQMPKLGSHGIRRAMRFKIWDVSAESTDEGVLVSFSIPKGCYATAVLREVMKVDVY
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttaaatgcagaaacatatctcacccctcaaaaagggataggggggcagatcagaacc
aaaaatgaggatttctatgtggaggaaatcccggaaagtaatcccagtggtgaagggcca
aacacctggctttggattgagaaaaatagtaggaccactctggatgtgcttttagacatt
gcccgtgaacttaaaataaaccgaaagcaaatgggctttgcaggaatgaaggataaaaag
gcagtcaccagacagtggatatgcgtaagtaacaaaacccctgaagaactccaggggctg
ggagaaaagctccataatgttaaaattattgacataattcccaatcagaagaaacttcga
atggggcaactggtggggaacaagttccgtttaatggtaagagatgttgaggatcctggg
gcagctgctcaggaagctcaggaaatacttaaccagttaaaggagaggggagtgcctaac
tattatggataccagcgttttggtaaggaccgtcccaacacccacctggtgggtaaagca
ttaatcatggggggtgtaaaggaggcggtggaccgttacattggacacccttacgatact
gagccaaaacacatccaggaggcccgtcgattttatgatgaaggggaactggaggagtct
ctggagtcaatgcccagtgggatgagatacgagaagatgatgttacgtgccctaatcaag
gagatgaaaaaaaggggcgaattaacggagaaatcctatattttggcacttagaagcatc
cccaaacccctgagcaggatgcttgtccatgcataccagtcatatcttttcaacagagcg
gttagtgaacgtaccaagcttggtattgaccagtacgtgaagggagatattttaattgat
aatgaagaacatctgatccacgaattttcagaagaagaaattgataatgaaattaaaaac
ttccaggcccatccatcatcgccactctacggtagtaaagtgccactggccggtggtaaa
ctgggagaaatggagcagaagatattggatgaggagaaattgaaacttgaggactttacc
gtgccccagatgcctaaactgggtagtcatggtatacgcagggccatgcgctttaaaata
tgggatgtttctgctgaatcaactgatgagggtgttctggtgagtttctccattcccaag
ggttgttacgcaactgcagttttaagagaagttatgaaggtggatgtgtattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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