KEGG   Methanobacterium sp. MZ-A1: BK008_08865
Entry
BK008_08865       CDS       T05317                                 
Name
(GenBank) single-stranded DNA-binding protein
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
metn  Methanobacterium sp. MZ-A1
Pathway
metn03410  Base excision repair
metn03430  Mismatch repair
metn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:metn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BK008_08865
   03430 Mismatch repair
    BK008_08865
   03440 Homologous recombination
    BK008_08865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:metn03400]
    BK008_08865
DNA repair and recombination proteins [BR:metn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     BK008_08865
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BK008_08865
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BK008_08865
SSDB
Motif
Pfam: DHHA1 DHH_CID DHH
Other DBs
NCBI-ProteinID: AUB58414
UniProt: A0A2H4VK06
Position
complement(1816265..1817662)
AA seq 465 aa
MAVNGKDMDKSLAKANEMVKESEDVKIYSHIDCDGISAGAILSLTMDRLEIDHEIEFINL
DQIPELEKENELTIFSDLGSGQKLDNFQTSQSKVLILDHHPPVRKISSGENGFLEINPNH
HGIDGSFQVSGGGMCYLLAKTFGYHDLSWIGVLSAVGDMQNSLSGKLTGINAGILEDGVN
KGLVGSVNDLAIYGRQTRPLFVALSYFGDVKLPITNNRNEAIQFLKNLDIPIRNGKKQRT
LYDLSSAEKGRIFTELVRMMSREVPPRYVRYIPRLVAGDAYEFLKEEEYSPLRDASEFST
AINACSRHKNPNVALKVLKGDRGMALDEMEMQGKEHRQYLAQKMSWIQEEDRIIHLKNLQ
YFQGNGIKSEVIGTIAGMILSYGDWRKPMIGFTHTNDESGGLKVSLRCSRLLAFDGIHFG
HIINKVAAKVGGSGGGHSMACGAYIPGGKQDEFLKLFDETLNGIL
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggctgtgaatggaaaagatatggataaatctttagctaaagctaatgaaatggtcaaa
gagtctgaggatgttaaaatatacagccacatagactgtgacgggatatccgccggagca
atactatctttaaccatggatcgtctggaaatagaccatgaaatagaattcataaacctg
gaccagatccctgagttggaaaaagaaaatgaactcaccatattctctgatcttggttca
ggacaaaaattagataacttccagacatcccagtccaaagttctcatcctggaccatcac
cccccggtaaggaaaatatcctcaggagaaaacggttttctggagataaatcccaatcat
catggtattgatggttccttccaggtttcaggaggaggtatgtgctatcttctagctaaa
acctttggttatcatgatttaagctggattggtgttttaagtgcagttggcgacatgcaa
aacagtctatcaggtaagttaaccgggataaatgcaggcatactagaagatggtgtcaat
aagggactggtgggatcagttaatgacttagccatctacggaaggcaaaccagaccatta
tttgtggccttgtcctactttggcgatgtgaagcttcccatcaccaataatcgaaacgaa
gcaattcaattcctaaaaaacctggacatacccattaggaatggtaaaaaacaacgaaca
ctttacgatttaagctccgcggaaaagggccggatcttcaccgaactggtgaggatgatg
agccgggaagttcctccccgttacgttaggtacattccccgcctggttgccggggatgcc
tatgaatttttaaaagaggaggagtactcacccctccgtgatgccagtgaattttcaaca
gccatcaacgcttgcagtaggcataaaaatcccaatgtggctttaaaggtcctcaaagga
gataggggtatggctctggatgaaatggaaatgcagggaaaggaacaccgacagtacctt
gcccagaagatgagttggatccaggaggaagaccggatcatacatttgaagaacttgcag
tacttccaaggtaacgggataaaaagtgaggttattggaaccatagccggcatgatcctc
agctacggtgactggagaaaacccatgattggtttcacacacaccaatgatgaaagtggt
ggtttgaaggtttctctgcgctgttcacgacttttagcatttgatggtatccactttggc
catatcatcaataaagtagcagccaaggtagggggaagtggtggtggccattccatggcc
tgtggtgcctacattccaggaggaaaacaggatgaattccttaaactctttgatgaaaca
ctgaacgggatcctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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