KEGG   Methylorubrum extorquens PA1: Mext_0207
Entry
Mext_0207         CDS       T00640                                 
Name
(GenBank) ABC transporter related
  KO
K03701  excinuclease ABC subunit A
Organism
mex  Methylorubrum extorquens PA1
Pathway
mex03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Mext_0207
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mex03400]
    Mext_0207
DNA repair and recombination proteins [BR:mex03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Mext_0207
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Mext_0207
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 nSTAND1 DnaJ_CXXCXGXG AAA_29 AAA_16 Anti-TRAP RsgA_GTPase DUF5351
Other DBs
NCBI-ProteinID: ABY28633
Position
223664..226360
AA seq 898 aa
MDQVKPKERVRIARAGAGRPGYVTVKGAREHNLRDVDVEVPRDALVVFTGVSGSGKSSLA
FGTLYAEAQRRYFESVAPYARRMIDQVGVPDVDSIEGLPPAVALQQQRGTPSARSSVGSV
TTLSSLVRMMYSRAGTYPPGQPMLYAEDFSPNTPQGACPSCGGLGRVYQATEASMVPDPS
LTIRERAVAAWPQAWGGQNLRDILVSRGVDVDTPWKDLPRALRDWILFTDDQPQEPVYAG
LSPEQTRLARRRRLEPSYMGTFTSARRHVLGTFTNSQSALMRRRAASYLVSEDCPVCQGK
RLKPEALSVTFAGLDIGELSRMPLADLAEAMRPAAEDRLPDEADGSAPDTLDRDTGLRDR
ARRAASGASAHAGAPDVRATPNLSIEKRLAAQRLAADLIDRIGTLTELGLGYLSLDRVTT
TLSSGELQRLRLATQLRSQLFGVAYVLDEPTAGLHPADGDAMHDALAGLLASGNSLFVVE
HDIGTMRRADWLVDVGPAAGEHGGTVLYSGPPEGLRDVEASRTRLHLFGMAEPPQRPRRE
PSGWLRLEGIVRNNLRGVSAAFPLGCLTAVTGISGSGKSSLVSQALLELVGDRLGRPVEI
DDEPEDPLDDAPGPTEGRIVGGMDGIRRLVKVDQKPIGRTPRSNLATYTGLFDAVRKLFA
ATPEARKRRYDAGRFSFNVAKGRCPACEGEGFVSVELLFMPSVYAPCPTCHGTRYAPDTL
EVTWNGLTIADVLGLTVERACDAFADEPSVLRPLAVLRDLGLGYLRLGQPATELSGGEAQ
RIKLATELQRGQRGGTLYVLDEPTTGLHPTDVDRLMLQLNGLVDAGNAVVMVEHDMRVVA
GADHVIDVGPGAGNLGGTVVAAGHPEDVAEARGSRTAPYLRDELMAYAGQESSPRLAG
NT seq 2697 nt   +upstreamnt  +downstreamnt
atggatcaagtgaagcccaaggaacgggtcaggatcgctcgggccggcgcgggtcgacca
ggctacgtcacggtaaagggcgcccgcgagcacaatctgcgcgacgtcgacgtggaggtg
ccgcgcgacgccctcgtggtgttcaccggcgtctcgggctccggcaagtcttcgctcgcc
ttcggtacgctctacgcggaggcccagaggcgctacttcgaatcggtcgcgccctacgcg
cgccggatgatcgatcaggtcggggtgcccgacgtcgattccatcgaggggcttcccccg
gcggtcgccctccagcagcagcgcgggacgccgagcgcacgctcctcggtcggcagcgtc
accactctgtcgagccttgtgcggatgatgtattcgcgcgccggcacctacccgccgggc
cagccgatgctttacgcggaggacttctcgcccaacacgccccagggcgcctgcccctcc
tgcggcgggctcggacgagtctatcaggcgacggaagcgtcgatggtgccggacccctcg
ctgacgatccgcgagcgcgccgtcgcggcctggccgcaagcctggggcgggcagaacctg
cgggacatcttggtgagccggggcgtcgatgtcgacacgccctggaaggacctcccgagg
gcgttgcgcgactggatcctgttcacggacgaccagccgcaggagccggtctatgccggg
ctctccccggagcagacgcggctggcccgccggcgtcgcctggagccgagctacatgggc
acgttcacgagcgcccgccgccacgtgctcggcaccttcaccaactcgcagagcgccctc
atgcgccgacgggcggcaagctacctcgtgagcgaggattgcccggtctgccaaggcaag
cgcctgaagcccgaagcgctctcggtcaccttcgcggggctggatatcggcgagctgtcg
cggatgccgctcgccgacctggccgaagcgatgcggccggcggccgaggaccggctgccc
gacgaggctgacggcagcgcgccggacaccctcgaccgcgacacgggccttcgggatcgc
gcccggcgcgccgcgtccggagcctcggcccatgcgggcgcgccggacgtgcgcgcgacg
ccgaatctttccatcgagaagcggctggccgcccagcgcctcgcggccgacctcatcgac
cggattggaacgctgacggagctgggtctgggctacctgtcgctggaccgggtgaccacg
accctgtcctcgggcgagttgcagcggctgcgcctcgccacccagctccgctcgcagctc
ttcggcgtggcctacgtgctcgacgagcctacggccgggctgcaccccgccgacggcgat
gccatgcacgacgcgctggccgggctgctcgcctcgggcaattcgctattcgtcgtcgag
cacgacatcggtacgatgcgccgcgccgactggctcgtcgatgtgggtccggcggcgggc
gagcacggcggcaccgtgctctatagcgggccgccggaaggccttcgcgacgtggaggcg
tcgcgcacgcgtctccacctgttcggcatggccgagccgccgcagcgcccgcggcgggag
ccttcgggatggctgcgcctggagggcatcgtccgcaacaacctgcgcggggtctcggcc
gcgttcccgctgggttgtctcaccgccgtgacgggcatctccggctccggcaaatcgagc
ctcgtgagccaagccctgctggagctcgtcggcgaccgcctcggacggcccgtcgaaatc
gacgacgagccggaagatccgctcgacgacgcgccgggcccgacggaggggcgcatcgtc
ggcgggatggacgggatccggcgtctggtgaaggtcgatcagaagccgatcgggcgcacg
ccccgctcgaatctcgcgacctataccggtctgttcgacgccgtccgcaagctgttcgcc
gccacccccgaggcccgcaagcgccgctacgacgccggccgcttctccttcaacgtcgcg
aagggccgttgcccggcctgcgagggcgaaggcttcgtcagcgtcgaactcctgttcatg
ccgagcgtctacgccccctgcccgacctgccacggcacccgctacgcgcccgacacgctg
gaggtcacctggaacgggctgaccatcgcggacgtgctcgggctcactgtcgagcgcgcc
tgcgacgccttcgcggacgagccgtccgttttgcgacccctggccgtgctgcgagatctc
ggcctcggctacctgcgcctgggccagccggcgaccgaactctccggcggggaagcccag
cgcatcaagctcgccacggagcttcagaggggccagcgcgggggcacactctacgttctc
gacgagccgacgaccgggctgcacccgaccgacgtggaccgcctcatgctccagctcaac
ggcctggtcgatgcgggcaacgcggtcgtcatggtcgagcacgacatgcgcgtcgtcgcc
ggagccgatcacgtcatcgacgtggggcccggcgccggaaacctcggcggtaccgtcgtg
gcggccggccatcccgaggacgtggccgaggcgcgagggagccggacggcaccgtatctg
cgggacgaactcatggcctatgcgggccaggagtcttcaccacggcttgccggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (30)   

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