KEGG   Methylorubrum extorquens PA1: Mext_2762
Entry
Mext_2762         CDS       T00640                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mex  Methylorubrum extorquens PA1
Pathway
mex03410  Base excision repair
mex03430  Mismatch repair
mex03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Mext_2762
   03430 Mismatch repair
    Mext_2762
   03440 Homologous recombination
    Mext_2762
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mex03400]
    Mext_2762
DNA repair and recombination proteins [BR:mex03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Mext_2762
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Mext_2762
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Mext_2762
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB ATPgrasp_N
Other DBs
NCBI-ProteinID: ABY31153
Position
3093878..3095713
AA seq 611 aa
MVARVTAAMLIDPSSDLPRPFLDVTASALGRPWRERCGDPGLQALAVTMTQAYGLPDLLA
RVLVGRGVRPAEADAYLAPRLRDLMPDPSVLVDMEAAVERLAYAVRAREAVAIFGDYDVD
GASSAALLAGYLRALGVPVRIHIPDRITEGYGPNVGAVTMLREEGAGLLVCVDCGTAGHE
PLAAAAALGLDVIVLDHHGAPEELPQTRALVNPNRLDDLSGLGHLCAAGVVFMTLVALAR
RLRRDGVFATSTEPRLTDFLDLVALATVADVVPLTGLNRAFVVQGLAVMRGRGRPGLAAL
LDAAGLSEPPEAWHLGFLVGPRINAGGRIGDAGLGARLLTTTDPMEARRIADELDRLNRE
RQAIEAQAVAEAEAEMDAHLTRDPDRPVLIAASPEWHPGIVGLIAARLKERFGRPAFAFA
VKPDGSAVGSGRSVVGADLGGAVRGAVEAGLAVKGGGHAMAAGVTLPPGGLAAFGDSLTH
DLVEAVGRARAAEALLIDGTVSAGGATAELVRLIQRAGPFGQGAPEPVMALPRHRIVDAG
IVGNGHVRARLVSGDGQAVGAIAFRAAQGPLGVALLGGIGRSFHVAGTLSCDRWRGAERA
QVRICDVAPCG
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggtcgcccgcgtgaccgccgccatgctcatcgatccgtcctcggacctcccgcgtccg
ttcctcgacgtcaccgcctctgcgctcgggcggccgtggcgcgagcgctgcggcgatccc
ggcctccaagcgctcgccgtgacgatgacgcaggcctatggcctgccggatctgctcgcg
cgcgtcctggtcgggcgcggcgtacggccggcggaggcggacgcctatctcgccccgcgt
ctgcgcgacctgatgccggacccgtcggtgctcgtggatatggaagcggcggtcgagcgg
ctggcctatgccgtgcgcgcccgcgaagcggtggcaatcttcggcgattacgacgtggac
ggagcgtcgagcgcggccctgctcgccggctatctccgggcgctcggcgtgccggtgcgc
atccatattcccgaccgcatcacggaagggtacggccccaatgtcggcgccgtcacgatg
ctgcgcgaggagggcgcgggcctgctcgtctgcgtcgattgcggcactgccggccacgag
ccgctggccgcggccgcggcgctgggcctcgacgtgatcgtgctcgaccaccacggcgcg
ccggaggagcttccgcagacacgggccctggtcaatccgaaccgtctcgacgacctgtcc
ggcctcggccatctctgcgcggcgggcgtcgtcttcatgaccctcgtcgcgctggcccgc
cgactgcggcgggacggtgtcttcgcaacatccaccgagccgcgcctcaccgacttcctc
gatctcgtggcgcttgccaccgtcgccgacgtggtgccgctcaccggtctcaaccgggct
ttcgtcgtccagggactcgcggtgatgcgcgggcgcgggcgtccgggattagccgcgctg
ctcgacgcggccgggctgagcgaaccgccggaagcgtggcatctcggctttctcgtcggg
ccgcgcatcaatgccggcgggcggatcggcgatgccggtctcggcgcgcggctgctcacc
accaccgacccgatggaggcccgtcgcatcgccgacgaactcgatcggctcaaccgtgag
cggcaggccatcgaggcgcaggcggtcgccgaggccgaggcggagatggatgcccacctc
acacgcgatccggaccgtccggtcctgatcgccgcctcgcccgaatggcatcccggcatc
gtcggcctcatcgccgcccggctcaaggagcggttcggccggccagccttcgccttcgcg
gtcaagcccgatggcagcgccgtcggctccggccgctccgtcgtcggtgcggatctcggc
ggtgccgtgcgcggcgcggtcgaggcggggctcgcggtcaaaggcggcgggcatgccatg
gccgcgggcgtgaccctcccgcccggaggcctcgccgccttcggggacagtctcacccac
gatctcgtcgaggccgtcggccgggcccgtgccgccgaggcgctgctgatcgacggcacc
gtgagtgccggaggcgcgaccgccgaactggtgcgcttgattcagcgggccggaccgttc
ggacagggggcgcccgagccggtgatggccttgccccgccaccgcatcgtcgatgccggg
atcgtcggcaacgggcatgtccgcgcccgcctcgtcagcggtgacgggcaagcggtcggc
gcgatcgccttccgtgccgcgcagggtccgttgggcgtcgccctgctcggcgggatcggg
cggagcttccacgtcgcgggaaccctgtcgtgcgaccgctggcgcggggcggagcgggcc
caggtgcgaatctgcgacgtggcgccctgtggatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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