KEGG   Martelella endophytica: TM49_16025
Entry
TM49_16025        CDS       T03801                                 
Name
(GenBank) pseudouridine synthase
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
mey  Martelella endophytica
Brite
KEGG Orthology (KO) [BR:mey00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mey03009]
    TM49_16025
Enzymes [BR:mey01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     TM49_16025
Ribosome biogenesis [BR:mey03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    TM49_16025
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AJY46840
UniProt: A0A0D5LS99
Position
3482968..3483957
AA seq 329 aa
MAGIEHIKVDHDEAGMRLDRWFKLHYPGLGFGALQKLLRSGQIRVDGGRAKSDTRVEPGQ
MVRIPPINVDAKAAGPIASKALKHSPDGELLSRMLLHEDERVFVLNKPAGLAVQGGSGVV
RHIDKMLEAWTNKKGEKPRLVHRLDRDTSGVLVIARSRRAAQMLTEAFRERTTKKTYWAL
VKGVPRKREDKISTWLVKEQTPDGDRMRIAKHGEPDSDHAVSFYRVVETAANSLAWLEME
PYTGRTHQLRVHAHYIGHPILGDPKYFDDDPNWDFPGGLQKRLHLHARHIDIPHPDGGRL
KVTAPLSPHMVQSWNLLGFDADRADLDKD
NT seq 990 nt   +upstreamnt  +downstreamnt
atggcgggtatcgaacacatcaaggtcgaccacgacgaggcgggcatgcggctcgatcgc
tggttcaagctgcattatccgggcctcggttttggtgcgctgcagaagctgctgcgctcc
ggccagatccgtgtcgatggcggccgggccaagagcgacacgcgcgtcgaacctggccag
atggtgcgcattccaccgatcaatgtcgacgcgaaagccgccggtccgatcgccagcaag
gcgctaaagcattcgccggatggcgagctattatcgcgcatgctgctgcacgaggatgag
cgcgtgttcgtgctgaacaagccggctggccttgcggtgcagggcggctcgggcgtcgtg
cgccatatcgacaagatgctggaggcttggaccaacaagaagggcgagaagccgcgcctc
gtccatcgtctcgaccgggatacctccggcgtgctggtcatcgcccgctcgcgccgggcc
gcgcagatgctgaccgaggcctttcgcgaacgtaccaccaagaagacctactgggccctg
gtgaagggcgtgccgcgcaagcgcgaggacaagatctcgacctggctggtcaaggagcag
acgccggatggcgaccgcatgcgcatcgccaagcacggcgagccggattccgaccacgcc
gtgtccttctaccgcgtcgtcgaaacggcggccaacagtctcgcctggctggagatggag
ccctataccgggcgcacccatcagcttcgcgtgcatgcccattacatcggccatccgatc
ctcggcgacccgaaatatttcgatgacgacccgaactgggattttcccggcggcctgcag
aagcgcctgcatctccacgcccgccacatcgacattccccatcccgatggcggccggctg
aaggtcaccgcgccgctgtcgccgcatatggtgcagagctggaatcttctgggtttcgat
gccgatcgcgccgatctcgataaggactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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