KEGG   Pseudoduganella flava: GO485_12810
Entry
GO485_12810       CDS       T06346                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
mfla  Pseudoduganella flava
Brite
KEGG Orthology (KO) [BR:mfla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mfla03016]
    GO485_12810 (thpR)
Enzymes [BR:mfla01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     GO485_12810 (thpR)
Transfer RNA biogenesis [BR:mfla03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    GO485_12810 (thpR)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: QGZ39844
UniProt: A0A562PWI8
Position
3059634..3060167
AA seq 177 aa
MIANQPDRTPESAVTGTATRKLFFALWPGDAERAALAALQADVKGRLTPPAKLHLTLAFL
GHLPAAGVPALLDIRAALAVPPVRLVFDCYGYFARPRIAWAGMTQVPAELVALHDDLVRR
LGAAGFSAATHGSFKPHVTLAREAKEAPPDAPPAPVVWNVREAVLVESLPDGRYVPF
NT seq 534 nt   +upstreamnt  +downstreamnt
atgatagcaaatcaaccggaccggacgcccgaaagcgcggtgacaggcactgcgacccgc
aagctgttctttgcattgtggcctggcgatgccgagcgcgcggcgctggccgcgctgcag
gccgatgtgaaaggccgcctgacgccgccggcgaaactgcacctgacgctcgccttcctg
gggcacctgccggccgccggcgtgccggcgctgctggacatccgtgccgcgctggccgtg
ccgcctgtgcggctcgtcttcgattgctacggttatttcgcccggccgcgcatcgcgtgg
gccggcatgacgcaggtgccggccgagctggtggcgctgcacgacgacctggtgcgccgg
ctcggcgcggccggcttttcggccgccacgcatggctcgttcaagccgcacgtgaccttg
gcgcgcgaggcgaaggaagcaccgcccgatgcgccgccagcgcccgtcgtgtggaacgtg
cgcgaagcggtgctggtcgaatcgctgccggacgggaggtatgtgcctttctag

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