KEGG   Mariprofundus ferrinatatus: Ga0123462_1164
Entry
Ga0123462_1164    CDS       T05213                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mfn  Mariprofundus ferrinatatus
Brite
KEGG Orthology (KO) [BR:mfn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mfn03016]
    Ga0123462_1164
Enzymes [BR:mfn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Ga0123462_1164
Transfer RNA biogenesis [BR:mfn03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Ga0123462_1164
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: ATX82028
UniProt: A0A2K8L3X1
Position
1183887..1185086
AA seq 399 aa
MSDSSYQFINSQTQLEKACIEISRCRVLCVDTEFHRESTYYPEFALLQIYGCGQCWIIDP
IELPDLTPIWKIMANPEILKVFHAGRQDVEIVVKESGFMPLPLFDTQIAAALLGFGQQIG
FGNLVQRITKKTLAKQESFSDWKARPLRQKQLDYAADDVIWLMPVYQHLKERLEAQGRMN
WLIEEQASLCDPATYESDEANVFWRVKGSNRLKGRQLATLRALSAWRERQAQHHNIPRRR
MIADEQLLEMSRRDKLTLESMSGIRGVNSGFVKRHGDAIINAWQSGMECPEEHWPKLPAR
RHNTKGTELRLEMLDTLVRLKAEDGEIASPILASKSDLSELASWGYRCKGDVPEVACLHG
WRYELVGHDLLRLLRGEICLHLDPNTGMPVITEFDQTCQ
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgtccgactcatcctaccagttcattaactcccagacgcagctagagaaagcgtgcatc
gagatcagccgctgccgtgtactctgtgtcgatacagagtttcaccgtgaatcaacttac
tatcctgagtttgcgctgcttcagatttacggttgtggccagtgctggattatcgacccg
atagaattaccagacctgacccccatctggaaaatcatggccaatcccgagattctgaaa
gtatttcatgccggccgacaggatgttgagattgttgtcaaggaatcgggattcatgcct
ctgccgctgtttgacacgcagattgctgctgcactgctcggattcggacagcagataggc
tttggcaaccttgtacagcgcatcaccaagaaaacactggccaaacaggagtctttcagc
gactggaaagcgcggccgctacggcagaagcagcttgattacgctgctgacgatgtaatc
tggttgatgcctgtctaccagcacctgaaagagcggctggaagcccagggccgcatgaat
tggctaatcgaagagcaggcttcgctctgtgacccggccacatacgaaagtgatgaagcg
aatgttttctggcgtgtaaaaggctctaaccgcctgaaaggcaggcaactggcaacactc
agggctctttcggcatggcgggagcgccaggcacagcaccacaatattccgaggcgccgc
atgattgcggatgagcaactgcttgaaatgtcacgcagggacaaattgactctggagagc
atgagtgggatccgcggcgttaactctggtttcgtcaaacgccatggcgatgcgattatc
aatgcatggcagagtggcatggagtgccctgaagagcattggccaaagcttcctgcacgc
cgccacaatacaaaaggaaccgaactgaggctggagatgctggacacgctggtgcggctg
aaggctgaagatggagagatcgcctccccgatacttgccagcaagtcggacctctcagaa
cttgcttcatggggctatcgttgcaagggagatgttcccgaggtggcctgcctgcatggc
tggcgatacgaactcgttggccatgatctgttgcggcttttacgcggtgagatatgcctg
caccttgatccgaataccggcatgccagtcatcacagaatttgatcagacatgccagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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