KEGG   Mariprofundus ferrinatatus: Ga0123462_1172
Entry
Ga0123462_1172    CDS       T05213                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
mfn  Mariprofundus ferrinatatus
Pathway
mfn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mfn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Ga0123462_1172
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mfn03019]
    Ga0123462_1172
Messenger RNA biogenesis [BR:mfn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Ga0123462_1172
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 Helicase_RecD AAA_22 AAA_19 ERCC3_RAD25_C Helicase_C_2 PRAI UvrD-helicase
Other DBs
NCBI-ProteinID: ATX82036
UniProt: A0A2K8LCL8
Position
1192238..1193473
AA seq 411 aa
MKFDRYYISSELKKNLKSLGFKRPTDIQFKAIPSILNGEDVLAIAQTGTGKTAAFAIPVI
DKVHRAKTSKRSRGIKCIVMAPTRELTQQIGQVFETLANHTKVKTFALFGGVEQERQIAR
LQDGIDILVTTPGRMFDLINQEVIRLHMVDTLVLDEADHMLDLGFIEDIKYVKKMLTRPH
QTLFFSATINDEIRKLAYSQVKSAAIRIQVSPEDKVSRNVSHAVMFVEQDDKRFFLERLL
NENPESKMIVFVRTKVRAERVVKAMERVGITAVNIHGDKEQKERTEAMQQFRDGACRIMV
ATDVSARGIDIPDVSYVINYDLPEKPENYVHRVGRTGRGVNKGTAISFCSQKEKALLEEI
QGFLNKPIEVLSIGKEDYAATIALSPEAADLKSLVEEHDAWLNKKRPRRRK
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgaaatttgatcgctattacatctcatcagagctgaagaagaacctgaaaagtctagga
tttaaacgacctaccgacatccagttcaaggcgattccgtcgattctgaacggagaggat
gtgctggccattgctcagaccggaacaggaaaaacggcagcctttgccattccggtgatc
gacaaggtgcatcgcgccaagaccagcaagcgtagccgcggcatcaagtgcatcgtcatg
gcccctacccgcgaactgacgcagcagatcggccaggtgttcgaaacgctcgccaaccat
accaaggtcaaaacctttgcgcttttcggcggtgttgagcaggagcgacagatcgccagg
ctgcaggatggtatcgatatccttgtcaccacacccgggcgcatgttcgacctgatcaat
caggaggtgatccgcctgcacatggttgatacgctcgtgctcgatgaggccgaccacatg
cttgatctcggctttatcgaggatatcaagtacgtgaagaagatgctgacgcgcccgcac
cagaccctcttcttctctgccaccatcaatgatgagattcgaaaacttgcctactcgcag
gtaaagagtgccgccatccgcattcaggtctcgcccgaggacaaggtttccaggaatgta
tcccatgccgtgatgttcgttgagcaggacgacaaacgcttctttcttgagcgactgctc
aatgaaaaccctgagagtaaaatgattgtcttcgttcgcaccaaagtgcgcgctgaacgc
gttgtaaaggccatggagcgtgtaggcatcactgctgtgaacattcatggtgacaaggag
cagaaagaacgcacagaggcaatgcagcagttcagggatggagcgtgtcgcattatggtc
gccaccgatgtcagtgcacgaggcatcgatatcccggatgtgagctatgtgattaattat
gatcttcctgaaaagcctgaaaactatgtacaccgggttggccgtaccggtcgaggtgtt
aacaaaggaacagccatctcattttgcagccagaaagagaaagcactgcttgaagagatt
cagggcttcctcaataaaccgatcgaggttctgagtatcggcaaagaggattatgccgcg
accatcgcgctttcacctgaagcggctgaccttaaatcacttgtcgaagaacatgacgca
tggctgaacaaaaagagaccaaggcgccggaagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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