KEGG   Mariprofundus ferrinatatus: Ga0123462_1788
Entry
Ga0123462_1788    CDS       T05213                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mfn  Mariprofundus ferrinatatus
Pathway
mfn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mfn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Ga0123462_1788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mfn03021]
    Ga0123462_1788
   03019 Messenger RNA biogenesis [BR:mfn03019]
    Ga0123462_1788
Transcription machinery [BR:mfn03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Ga0123462_1788
Messenger RNA biogenesis [BR:mfn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Ga0123462_1788
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA AAA_25 NACHT AAA_22
Other DBs
NCBI-ProteinID: ATX82635
UniProt: A0A2K8L5N6
Position
complement(1817687..1819405)
AA seq 572 aa
MSNEIEVAQEVDASEAKPADEKPARRGRPRKVVEAAPEAAVAAEKPRRRGRPPKEKVEAD
AGEKEAPPADVAAEEKPRRRSRTPKAETSESEVEAKADASSTNHDEAARDQSQEHGKRPR
WKKGDRNNKPDRNGKRGRRDDSDERISDEMEGVTLNLKEVSAKSPTELLELADQYDIENA
AGMRKQEQVSAILRAHGLRGGTIYSEGVLEILPDGFGFLRSPDANYLSGPDDVYVSSHQI
RRFFLRKGDTVAGEIRSPRRGEKYFALKTVDTTNGQSPEQARTKVLFDNLTPLYPDERLH
MEVENPTKKDITGRIIDIVSPIGKGQRALLVAPPRTGKTVMMQSIAHSIEANHPAVELIV
LLIDERPEEVTDMKRSVKGEVVSSTFDEPAQRHVQVSEMVIEKAKRLVETGKDVVILLDS
ITRLARAYNTVVPSSGKILTGGVDANALHRPKRFFGAARNIEGGGSLTIIATALIETGSK
MDEVIFEEFKGTGNMEIKLDRKLADKRVFPSIDIAPSGTRKEELLTPREDLQKVWILRKI
LSPMGTIDAMEFLLDKLGTTKNNAEFFDRMNQ
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgtctaacgaaatcgaagtagcgcaggaagtggatgcttctgaggctaagcctgctgat
gagaaacctgcacgccgtggcaggcctcgcaaagtggtagaggctgctcccgaggcagct
gttgctgcggagaaacctcgtcgccgaggcaggcctcccaaggagaaggttgaagctgat
gcaggcgaaaaagaggcgccgccagctgacgtggcagctgaggagaagccgcgtcggcgc
agcagaacgcccaaggccgaaacttcggaaagtgaagttgaggcaaaggcagatgcttca
tccacaaaccatgatgaggcagccagggatcagtctcaggagcatggcaaacgcccgcgc
tggaagaagggtgaccgtaacaataaaccagaccgtaacggtaagcgcggtcgccgcgat
gattccgatgaaagaatttctgacgaaatggaaggggtgacgctgaacctgaaggaggtt
tcggccaagtcacctaccgaactgctggaactcgccgaccagtacgatatcgagaatgcc
gccggcatgcgtaagcaggagcaggtttccgccatccttcgtgcccacgggctgcgtggc
ggcaccatctacagtgagggcgtgcttgagattctgccggacggattcggcttcctgcgc
tctcccgatgccaactacctttcaggcccggacgatgtctatgtctcgtcgcaccagatc
cgccgcttcttcctgcgtaagggcgataccgtagccggagaaatccgctcgccacgccgc
ggcgagaaatattttgcactgaaaacagtcgacaccaccaatggccagtcacccgagcag
gcgcgtaccaaggtgctctttgacaacctgacgccgctctatccggatgagcgcctgcat
atggaggtcgagaatccaaccaagaaggatatcaccggccgtatcatcgatatcgtatcg
ccgatcggaaaagggcagcgcgctctgctggtggcaccgccacgtaccggtaaaacggtg
atgatgcagtcgatcgcacactcgatcgaggccaatcatccggctgtggagctgatcgta
cttttgatcgacgagcgtccggaagaggtgaccgacatgaagcgttcggtgaagggggag
gttgtctcatccaccttcgacgagccggcacagcgccatgtacaggtctccgagatggtg
atcgagaaggccaagcgactggtggagaccggcaaggatgtggtgatcctgctcgattcg
atcacccgactcgcgcgcgcctacaacaccgttgtgccatcctcgggcaagattcttacc
ggtggtgtggatgccaatgcgctgcaccgcccgaaacgcttcttcggcgctgcccgtaac
atcgaaggtggcggctccctgaccattatcgccaccgcgctgatcgagaccggctccaag
atggatgaggtgatcttcgaggagttcaagggtaccggtaacatggagatcaagcttgat
cgcaagctggcggacaagcgtgtattcccctctatcgacatcgcaccgtcgggcacccgc
aaggaggagttgcttacgccgcgcgaagatctgcagaaggtgtggatcctgcgcaagata
ctctcaccgatgggcaccattgatgcgatggagttcctgcttgataagctcggcaccacc
aagaacaacgccgagttctttgatcgcatgaatcagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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