KEGG   Corallococcus macrosporus HW-1: LILAB_31615
Entry
LILAB_31615       CDS       T01558                                 
Name
(GenBank) ECF subfamily RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mfu  Corallococcus macrosporus HW-1
Brite
KEGG Orthology (KO) [BR:mfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mfu03021]
    LILAB_31615
Transcription machinery [BR:mfu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LILAB_31615
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF ADSL_C Dynamin_M HTH_23
Other DBs
NCBI-ProteinID: AEI68204
UniProt: F8C877
Position
complement(7778800..7779429)
AA seq 209 aa
MSSGGVLGIGQEGAAAADASESRRQDAALLVRLRRGDPDAFELLVRTHQDRLYDFCVRMV
GDREEAHDLVQEIFVSVHQHVRRFREDAKLSTWLFRITRNHCINRLKYLKRRGRGRSEEY
DEATALFTEGGGTAPGPDAALEVARERARVQWAISQLEPDARMLVALRDIEGLSYDEIID
ITELPEGTVKSRLHRAREKLADLLGRLEP
NT seq 630 nt   +upstreamnt  +downstreamnt
gtgtcatcgggcggcgtgctcggaatcggacaggaaggggctgccgccgcggacgcgtcc
gagtcgcgccgtcaggacgcggccttgctggtccgcctgcgccggggggacccggacgcc
ttcgagctgctggtgcgcacccaccaggaccggctctacgacttctgcgtccgcatggtg
ggagaccgtgaggaagcccacgacctggtgcaggagatcttcgtcagcgtgcaccagcac
gtccggcgcttccgcgaggacgcgaagctgtccacctggctgttccgcatcacccgcaac
cactgcatcaaccggctcaagtacctcaagcgccggggccgggggcgctccgaggaatac
gacgaggccacggccctcttcaccgaaggtggcggcaccgcgcccggcccggacgccgcg
ctggaggtcgcgcgcgagcgcgcccgggtgcagtgggccatctcccaactggagccggac
gcgcgcatgctggtggcgctgcgcgacatcgaaggcctcagctacgacgaaatcatcgac
atcaccgagctaccggagggcacggtgaagagccggctccaccgggcccgggaaaagctg
gcggacctcctggggcggcttgagccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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