KEGG T06204: FSB76

Mucilaginibacter ginsenosidivorax: FSB76_11980

Entry

FSB76_11980       CDS       T06204

Name

(GenBank) RtcB family protein

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

mgk Mucilaginibacter ginsenosidivorax

Brite

KEGG Orthology (KO) [BR:mgk00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mgk03016]
    FSB76_11980
Enzymes [BR:mgk01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     FSB76_11980
Transfer RNA biogenesis [BR:mgk03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    FSB76_11980
Prokaryotic type
   tRNA splicing ligases
    FSB76_11980

SSDB

Motif

Pfam:

RtcB

Other DBs

NCBI-ProteinID:

QEC76633

UniProt:

A0A5B8VZ33

Position

2884465..2885865

AA seq 466 aa
MGNLKTKELDKIGYTGDALKSLAINAVARHYKHSNKADVMALLTAVRDNPAAYTADDRLQ
KIAEAFIEAEAEPALKTFKLMDEPAPIKIYGADEIEEIAKKQMTLALSLPISIRGALMPD
AHSGYGLPIGGVLATRNAVIPYGVGMDIGCRMALTIIDADEKFMKRYDHQIKQAIGKWTH
FGMEGSLPVPQDHEVLDSPLFNETPLLKKLRGKAEQQLGTSGGGNHFVEFGAIELAQNNA
TGLPAKTYMALLTHSGSRGLGANIARHYTQVAMNTCKLPREAQPLAWLDLDTEAGQEYWL
SMTLAGNYAKACHDRIHSNLLKSLGLKTLCKIENHHNFAWKDKLADGTEAIIHRKGATPA
HVGELGIIPGSMATPAYLVMGKGNADALYSASHGAGRAMSRHDARGSTTKSAMKKMLAGA
DVTLIDGSIEENPAAYKDIELVMNAQTELVAIQGKFWPRIVRMNKE

NT seq 1401 nt +upstreamnt +downstreamnt
atgggcaatttaaaaacaaaagaattagataaaataggctacacaggcgatgcattaaaa
agcctcgccatcaatgctgtagccaggcactataagcacagcaataaagccgatgtaatg
gcattattaacagctgtgcgggataacccggctgcctataccgccgatgaccggctacaa
aaaatagcggaagcatttattgaggctgaggcagaaccggccttaaaaacatttaagctg
atggacgagcccgcccctattaaaatttatggggctgatgaaattgaagagatagccaaa
aagcaaatgaccctggcactgtcattacccatcagtatccgtggtgccttaatgcccgat
gcacacagcggctatggcttgcccattgggggcgtgttggccacccgcaacgcggtgatt
ccctacggggtaggtatggatattggctgccgtatggccctaactattattgatgccgat
gaaaagttcatgaaaaggtatgatcatcaaattaaacaggcgataggcaaatggacacat
tttggcatggaaggtagcctgcctgtaccccaggaccatgaggtattggatagcccccta
tttaatgaaacgccactgcttaaaaagctgcgcggcaaggccgagcagcagttaggtaca
tcgggcggcggcaaccattttgtggagtttggtgcgatagaactggcccaaaacaacgcg
acgggcttacccgctaaaacctatatggccttgcttacccattcgggcagccgtgggctg
ggcgcaaatattgcccgccattatacacaggtggccatgaatacctgcaagcttccgcgc
gaagcgcagcccctggcctggcttgatctggataccgaagccgggcaggagtattggtta
agcatgaccctggccggcaattatgccaaagcctgtcacgaccggatacatagcaacctg
ttaaaaagccttggactaaaaacgctttgcaagatagaaaaccatcacaattttgcctgg
aaagacaaacttgcagatggcaccgaagccatcattcaccgtaaaggggcaacgcctgca
catgttggcgagttgggcatcatccccggcagtatggcaactcctgcttatttggtaatg
ggtaagggtaatgctgatgccttatactcggcatcgcatggtgccggccgggccatgagc
aggcatgacgccagaggcagcaccaccaaatcggccatgaaaaaaatgctggccggggct
gatgtaacgttgattgatggcagcattgaggagaacccggcagcttataaggatattgaa
ttggtaatgaatgctcaaaccgaactggttgccatacagggcaaattttggccgcgcata
gtacgcatgaataaagaatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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