KEGG   Mucilaginibacter ginsenosidivorax: FSB76_19190
Entry
FSB76_19190       CDS       T06204                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
mgk  Mucilaginibacter ginsenosidivorax
Pathway
mgk00470  D-Amino acid metabolism
mgk00550  Peptidoglycan biosynthesis
mgk01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:mgk00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    FSB76_19190 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    FSB76_19190 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:mgk01011]
    FSB76_19190 (murD)
Enzymes [BR:mgk01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     FSB76_19190 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:mgk01011]
 Precursor biosynthesis
  Amino acid ligase
   FSB76_19190 (murD)
SSDB
Motif
Pfam: Mur_ligase_M MurD_N MurD-like_N Mur_ligase_C 3HCDH_N NAD_binding_8 AlaDh_PNT_C DAO
Other DBs
NCBI-ProteinID: QEC77958
UniProt: A0A5B8W6T0
Position
4584905..4586236
AA seq 443 aa
MRLVVLGAGESGVGAAYLAQKQGYDVFVSDFGPIADKYKKQLEDWNISFEEKQHTEDLIL
NAVEVIKSPGIPDKAPIIKKIREKGIPVISEIEFAGRYCSAKIIGITGSNGKTTTSSLTY
HILKNGGLNVGLAGNIGKSFAYQVATENFDLYVLELSSFMLDDMFKFKVDIAVLLNITPD
HLDRYDYKLENYAASKFRVTQNQTAADYFIYCADDPETIKGMADRKFDAQLLPFSIETKI
EPGAYLENDNIVINTNQEHFTMSIQELALQGKHNIYNSMASGIVARVLELREGTIKESMG
NFKAIEHRLEFVANISGIRFINDSKATNVNSTWYALESMSSEVVLILGGVDKGNDYGMLK
DLVKQKVRSIVCLGKDNKRIHDAFEDDVHVIVNTFSAQEAAQVAFHLAEKGDTVLLSPAC
ASFDLFKNYEDRGNQFKAAVREL
NT seq 1332 nt   +upstreamnt  +downstreamnt
gtgcgccttgttgttcttggcgccggcgaaagtggtgttggtgcggcatacctggctcaa
aagcaggggtatgatgtgtttgtgtcggattttgggcccattgcagacaagtacaaaaaa
caactggaagactggaatatcagcttcgaagaaaaacagcataccgaagatttgatcctg
aacgcggttgaggtgatcaaaagccccggcattccggataaagcgccgatcatcaaaaaa
attagagaaaaagggatcccggtaatatccgaaattgaatttgcaggcaggtattgcagc
gcgaagattataggcataaccggatcaaacggtaaaactactaccagcagcttaacctac
catattttaaaaaatggcggtctaaatgtcgggctggccggcaacataggtaaaagcttt
gcttaccaggtggctaccgaaaactttgatttgtacgtgctggaactaagcagctttatg
ctggatgacatgtttaagtttaaggtagatattgcagtattgctcaatatcacccccgac
catttagacaggtacgattataagctggagaattacgcggcatccaaattcagggttacg
cagaaccagacggcggccgactatttcatttactgcgccgatgacccggaaaccattaaa
ggtatggccgaccggaaattcgacgcccaactattgcctttttctattgaaaccaagatt
gaaccgggagcatatctcgaaaacgacaatattgtcatcaacacaaatcaagaacatttt
acaatgtcaattcaagaactggccttacagggcaagcacaacatttacaactccatggca
tcaggtattgtagcaagggtgctggagttgcgggagggaacgattaaagagagcatgggc
aactttaaagctattgaacaccggcttgaatttgtagccaatatatcgggtatccgcttt
attaacgattcaaaggccaccaacgttaactcaacctggtacgcattggaaagtatgagc
agtgaggtagtattaatacttggcggtgttgataaaggtaacgattacgggatgcttaaa
gatttagtgaagcagaaggttagatcgatagtatgcctggggaaagacaacaagcgtata
catgatgcttttgaagatgacgtgcatgttatagtaaatacattctcggcccaggaggct
gcccaggtagcatttcacctggccgaaaaaggagatactgttttattatcacctgcctgc
gccagtttcgatctgtttaaaaattacgaagacaggggaaaccagtttaaagcagcggtg
agggaattgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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