KEGG   Mycolicibacterium goodii: AFA91_32260
Entry
AFA91_32260       CDS       T04008                                 
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
mgo  Mycolicibacterium goodii
Pathway
mgo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mgo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AFA91_32260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mgo03400]
    AFA91_32260
Enzymes [BR:mgo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AFA91_32260
DNA repair and recombination proteins [BR:mgo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AFA91_32260
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 AAA_11 Viral_helicase1 AAA_22 Helicase_RecD UvrD-helicase SH3_13 AAA_16 nSTAND3 PhoH AAA_28 NTPase_1 T2SSE Mg_chelatase AAA_29 CbiA Herpes_Helicase AAA_5 TrwB_AAD_bind SRP54 UvrD_C
Other DBs
NCBI-ProteinID: AKS35823
UniProt: A0A0K0XEJ7
Position
6885832..6887496
AA seq 554 aa
MSLLDAFAEILEPADVHVAQRLTALAGEPDASVELAVALAVRALRGGSVCVDLRAVAGQV
EIPELPWPDPDAWLAALAASPLLGEPPVLRLFGDLLYLDRYWLEEQQVCDDVLALVSVRP
EGTVPDVSRLFGLGFEEQRAAAKVALSQGLTVLTGGPGTGKTTTVARLLALLAEQAALAG
KPSPRIALAAPTGKAAARLQEAVQLEIDQLELVDRRRLTGLQATTLHRLLGPRPDTSSRF
RHHRANRLPHDVIVVDETSMVSLTMMARLLEAVRPQTRLVLVGDPDQLASVEAGAVLADL
VEGLGSRGVAELRTSHRFGESIGALASAIRAGDADAAVEVLAAAGEHIEWVREDPVEQLR
EVLVPHAMRLRQAAILGDKRAALATLDEHRLLCAHRRGPSGVDRWNRQVQRWLSEETGEP
LWGSWYVGRPILVTANDYGLKLYNGDTGVVVATPDGMRAVIGDSGTFATGRLTDVETMHA
MTIHKSQGSQADEVTVLLPSEDSRLLTRELFYTAVTRAKTRVRVVGAEAEVRAAIDRQAV
RATGLRRRLAPAGA
NT seq 1665 nt   +upstreamnt  +downstreamnt
gtgagcctgctggacgctttcgccgagatcctcgagcccgcggatgtgcacgtggcgcaa
cggctgaccgcgctcgcgggcgagccggatgcctcggtcgagctggcggtcgcactcgcg
gtccgcgcactgcgcggtggttcggtgtgtgtggatctgcgggcggtggccgggcaggtc
gagatccccgagttgccgtggcccgatcccgatgcgtggctcgcggcgttggcggccagt
ccgctgctgggtgagcctccggtcctgcggctgttcggtgatctgctgtatctggaccgc
tactggctcgaagagcagcaggtgtgcgatgacgtgctggcgctggtgtcggtgcggccc
gagggtacggtgccggatgtgtcgaggttgttcggcctgggcttcgaggagcagcgggcg
gcggcgaaggttgcgctgtcgcaagggctcacggtgttgacgggtgggccgggcacgggc
aagacgacgacggtggcgcggttgttggcgctgctggccgagcaggccgcgcttgccggg
aagccgtcgccgcggatcgcgttggccgcgccgaccggtaaggcggccgcacggttgcag
gaggccgtgcagttggagatcgatcagctcgagctcgtcgaccgcaggcgactgaccggg
ctgcaggccaccacgctgcaccgtctgctcgggccgcggcccgatacgtcgtcgcggttc
cggcaccaccgcgccaaccggctgcctcatgacgtgatcgtggtcgacgagacgtcgatg
gtgtcgttgacgatgatggcgcggttgttggaggcggtgcgcccgcagacccgtctggtg
ctggtcggcgatccggatcagttggcgtcggtggaggccggggcggtgctggcggatctg
gtcgaggggttgggctcgcgcggggtcgcggagttgcggacgtcgcaccggttcggcgag
tcgatcggtgcgctcgcctcggcgatccgcgccggtgatgccgatgccgcggtggaggtg
ctcgccgcggccggcgagcacatcgaatgggtccgcgaagatccggtcgagcagttgcgg
gaggtgttggtgccgcatgcgatgcggttgcggcaggccgcgattctcggcgacaaacgc
gcggcgctggccacgctcgacgaacacaggttgttgtgcgcgcaccggcgggggccctcc
ggcgtcgaccggtggaaccgtcaggtgcagcgctggctcagtgaagagaccggcgagccg
ttgtgggggtcctggtacgtcgggcgcccgatcctagtgaccgccaacgactatgggctc
aagctgtacaacggggacaccggcgtcgtcgtcgcgacaccggatgggatgcgggcagtg
atcggcgattcggggacgttcgcgaccggtcgcctcaccgatgtggagaccatgcacgcc
atgacgattcacaagtcgcagggcagccaggccgacgaggtgacggtgctgctgccgtcg
gaggattcgcggttgttgactcgggagttgttctacaccgcggtcacccgcgccaagacg
cgcgtgcgcgtcgtcggcgcggaggcggaggtgcgcgccgcgatagaccggcaggcggtg
cgcgctaccggactacgtaggcggctggcgcctgcgggtgcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (33)   

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