KEGG   Meleagris gallopavo (turkey): 100545751
Entry
100545751         CDS       T01523                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
mgp  Meleagris gallopavo (turkey)
Pathway
mgp03013  Nucleocytoplasmic transport
mgp03015  mRNA surveillance pathway
mgp03040  Spliceosome
mgp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mgp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100545751 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100545751 (ALYREF)
   03015 mRNA surveillance pathway
    100545751 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100545751 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mgp03019]
    100545751 (ALYREF)
   03041 Spliceosome [BR:mgp03041]
    100545751 (ALYREF)
Messenger RNA biogenesis [BR:mgp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100545751 (ALYREF)
    TREX complex
     100545751 (ALYREF)
Spliceosome [BR:mgp03041]
 Complex C
  Other components
   EJC/TREX
    100545751 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100545751 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 100545751
NCBI-ProteinID: XP_019477154
Position
20:4991134..4995440
AA seq 202 aa
CPLPAAGPCWRAPAPLSEASLSLQPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDF
GVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRP
MNIQLVTSQIDTQRRPAQSVNRGGMTRNRGGTGGFGGGGTRRGSRGGSRGRGRGAGRTSK
QQLSAEELDAQLDAYNARMDTS
NT seq 609 nt   +upstreamnt  +downstreamnt
tgtccgttgccggcagccgggccgtgctggcgggccccggcgccgctcagcgaggcgtcc
ctgtcgttacagccgaaacaactccccgagaagtggcagcacgacctcttcgacagcggt
tttggggcgggcgctggcgtggagaccggcgggaagctgctcgtctccaacttggacttc
ggcgtctcagatgcggatatccaggaactctttgcagaatttgggaccttgaagaaggcg
gcagtgcactacgacagatctggacgcagtctagggacagcagatgtgcattttgaaagg
aaagcagatgctctgaaagctatgaagcagtacaatggagtccccttggatgggcgcccc
atgaacattcagctggttacatcacagatagacacacagaggagaccagcacagagtgta
aacagaggtggcatgaccagaaaccgtggtggtacaggaggatttggtggtggaggtacc
aggcgaggtagtcgtggcgggagcagagggagaggcagaggggctggaagaacttccaaa
cagcagctctctgcagaagaactagatgcacagctggatgcttacaatgccaggatggac
accagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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