KEGG   Magnetospirillum gryphiswaldense MSR-1: MSR1_11760
Entry
MSR1_11760        CDS       T05662                                 
Symbol
rnc
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
mgry  Magnetospirillum gryphiswaldense MSR-1
Brite
KEGG Orthology (KO) [BR:mgry00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mgry03019]
    MSR1_11760 (rnc)
   03009 Ribosome biogenesis [BR:mgry03009]
    MSR1_11760 (rnc)
   03036 Chromosome and associated proteins [BR:mgry03036]
    MSR1_11760 (rnc)
Enzymes [BR:mgry01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     MSR1_11760 (rnc)
Messenger RNA biogenesis [BR:mgry03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MSR1_11760 (rnc)
Ribosome biogenesis [BR:mgry03009]
 Eukaryotic type
  90S particles
   RNase
    MSR1_11760 (rnc)
 Prokaryotic type
  rRNA processing factors
   MSR1_11760 (rnc)
Chromosome and associated proteins [BR:mgry03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     MSR1_11760 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: AVM73671
Position
complement(1164408..1165097)
AA seq 229 aa
MDAGPIHDLCQRLGHEFAQSQLLTQALTHPSVAQGRAPRRNTPYERLEFLGDRVLGLVVA
DMLFHRFPTEAEGALARRHAALVRRESLAVVAGQIGLPPCLTLSKGEEDAGGRGNPALLA
DACEAVIGALYADAGFEVAARFVRSAWTALMDAAAQPPKDAKTALQEWAQGLGKPLPVYT
VVGQDGPPHDPTFVVSVTVEGVDPVHGTGASKRVAEQAAAALLLEKVKA
NT seq 690 nt   +upstreamnt  +downstreamnt
atggatgccggaccgatccacgatctgtgccagcggcttggacatgaattcgcccaatcg
caattgctgacccaggccttgacccacccgtcggtggcacaaggccgcgcccctcggcgc
aacaccccgtacgaacgcctggaattcctgggtgatcgcgtgttggggctggtggttgcc
gacatgctgtttcatcgtttcccgaccgaggcggaaggggccttggcccggcgtcatgcc
gccctggtgcggcgtgaaagcttggccgtggtcgccggccagatcggattaccgccctgc
ctgaccttgtccaagggcgaggaagatgccggtggacgcggtaatcccgccttgctggcc
gacgcctgcgaagcggtgatcggtgccctttatgccgatgccggatttgaggtggcggcc
cgttttgtccgttccgcctggacggcgttgatggatgcggcggcccagccgcccaaggat
gccaagaccgcgctgcaggaatgggcgcaaggcttgggcaaaccgttgcctgtctatacc
gtggttggacaggatggaccaccccatgatcccacttttgtggtatcggtgaccgttgag
ggcgtcgatccggtccatgggaccggggcgtccaagcgggtggcggaacaggccgccgcc
gccttgctgttggagaaggtaaaagcatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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