KEGG   Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__1852
Entry
MGMSRv2__1852     CDS       T02960                                 
Symbol
rfbB
Name
(GenBank) dTDP-D-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
mgy  Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy00521  Streptomycin biosynthesis
mgy00523  Polyketide sugar unit biosynthesis
mgy00525  Acarbose and validamycin biosynthesis
mgy00541  O-Antigen nucleotide sugar biosynthesis
mgy01100  Metabolic pathways
mgy01110  Biosynthesis of secondary metabolites
mgy01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:mgy00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    MGMSRv2__1852 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    MGMSRv2__1852 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    MGMSRv2__1852 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    MGMSRv2__1852 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    MGMSRv2__1852 (rfbB)
Enzymes [BR:mgy01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     MGMSRv2__1852 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 adh_short 3Beta_HSD NAD_binding_10 KR Sacchrp_dh_NADP NmrA
Other DBs
NCBI-ProteinID: CDK99067
UniProt: V6F0Z9
Position
1951186..1952211
AA seq 341 aa
MSILVTGAAGFIGSALCRQLTARGDETVIALDRLGYAACLQALPAQAVFIQADIRDATAL
DAVFAQHAPRAVFHLAAETHVDRSIDTPLEFIEHNMVGTFQLLEATRRFWGERGRPDDFR
FVHVSTDEVFGSLEADEPAFTASSPYRPNSPYSASKAAADHLARAWMATYGLPVIVTNCS
NNYGPWQFPEKLMPLVIQKALAGHPLPLYGDGGNRRDWLYVDDHAAGLMAVLDHGEPGGT
YLFGSGREHSNLEVVKAICAQLDQWRPDPVGPYARLIQFVTDRPGHDRRYGIDPSHARRA
LDWQPRTDFADGIAATIRWCLDHPHWANRDYHGARLGLIPS
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgtcgattttggtcaccggggcggctggctttatcgggtccgccctgtgtcgccagctg
accgcgcggggggacgagaccgtcattgcccttgaccgtctgggctatgccgcctgcctg
caggccctgcccgcccaggccgtcttcatccaggccgatatccgcgacgccaccgccctg
gatgccgtcttcgcccagcacgccccgcgtgcggtgtttcatctggcggcggaaacccat
gtggatcgttccatcgacactccgctcgagttcattgaacacaacatggtcggcaccttc
caattgctggaagcgacgcggcggttctggggggagcgggggcggcccgacgacttccgc
tttgtccacgtttccactgacgaagtgttcggcagcctggaggcggacgagccggccttc
accgccagctcaccctatcgccccaattcgccctattcagccagtaaggcggcggcggac
cacttggcgcgggcatggatggccacctacgggttgccggtgatcgtcaccaattgcagc
aataattatggcccctggcagttcccggaaaagctgatgccgctggtgatccaaaaggcc
ttggccggtcaccccctgcccctttatggcgatggcggcaaccggcgtgactggctttat
gtggacgaccacgccgccggcctgatggccgtcttggaccacggcgagccggggggcacc
tatctgtttggatcggggcgcgaacacagcaatctggaggtggtcaaggccatctgcgcc
caattggatcaatggcgtcccgatccggtcggcccttatgcccgcctgatccagttcgtc
accgaccgtccgggacatgaccgccgctacggtatcgatcccagccatgcccgccgcgcc
ctggactggcagccgcgcaccgatttcgccgacggcatcgccgccaccatccgctggtgc
ctggaccatccgcactgggccaaccgcgattatcacggcgcccgcctgggcctgatacca
agttaa

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