KEGG   Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__3117
Entry
MGMSRv2__3117     CDS       T02960                                 
Symbol
ddpX
Name
(GenBank) D-ala-D-ala dipeptidase, Zn-dependent
  KO
K08641  zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
Organism
mgy  Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy01502  Vancomycin resistance
mgy02020  Two-component system
Brite
KEGG Orthology (KO) [BR:mgy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MGMSRv2__3117 (ddpX)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    MGMSRv2__3117 (ddpX)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mgy01002]
    MGMSRv2__3117 (ddpX)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:mgy01011]
    MGMSRv2__3117 (ddpX)
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:mgy01504]
    MGMSRv2__3117 (ddpX)
Enzymes [BR:mgy01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.13  Dipeptidases
    3.4.13.22  D-Ala-D-Ala dipeptidase
     MGMSRv2__3117 (ddpX)
Peptidases and inhibitors [BR:mgy01002]
 Metallo peptidases
  Family M15: zinc D-Ala-D-Ala carboxypeptidase family
   MGMSRv2__3117 (ddpX)
Peptidoglycan biosynthesis and degradation proteins [BR:mgy01011]
 Peptidoglycan biosynthesis and degradation
  Carboxypeptidase
   MGMSRv2__3117 (ddpX)
Antimicrobial resistance genes [BR:mgy01504]
 Gene sets
  Vancomycin resistance modules
   Vancomycin resistance, D-Ala-D-Lac type [MD:M00651]
    MGMSRv2__3117 (ddpX)
SSDB
Motif
Pfam: Peptidase_M15 VanY Peptidase_M15_4
Other DBs
NCBI-ProteinID: CDL00332
UniProt: V6F4N5
Position
3201747..3202316
AA seq 189 aa
MSPLVRITAASHDVDIDLTYTTPGNFTGQPVYATTAGCFLNAEADRLLTRAIELARPLGL
RLKIFDAFRPAEAQWILWNHTPDPGFLADPRRGSPHSMGAAVDLTLIDATSGAELDMGTA
FDEFTPRSHHGNQEIDAQAQRHRHLLMGIMTTAGWDFYRNEWWHYQLFNARANHPVLSDS
VLGPERMMP
NT seq 570 nt   +upstreamnt  +downstreamnt
atgtcgccgcttgttcgtatcaccgccgccagccacgacgtggatatcgacctgacctat
accacccccggcaacttcaccggacagccggtctatgcgacaacagccggctgctttttg
aacgccgaggccgatcgcctgctaacccgcgccatcgagttggcccgacccttgggcctg
cggctgaagatattcgatgccttccgcccggcggaagcccagtggattttgtggaaccac
acccccgatcccggttttctcgccgatccgcggcgcggctctccccattccatgggggcg
gcggtggacctgaccctgatcgacgcgaccagcggggccgagctggacatgggcaccgcc
ttcgacgaattcaccccgcgttcccatcacggcaaccaggaaatcgatgcccaggcccag
cgtcatcgccatctgctgatggggatcatgaccaccgccggctgggatttctatcgtaac
gagtggtggcactatcaactgttcaacgctcgcgccaaccatccggtgctcagcgacagc
gtgttggggccagaacgcatgatgccctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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