KEGG   Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__4139
Entry
MGMSRv2__4139     CDS       T02960                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
mgy  Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy02020  Two-component system
mgy02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:mgy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MGMSRv2__4139 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    MGMSRv2__4139 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mgy03021]
    MGMSRv2__4139 (rpoN)
Transcription machinery [BR:mgy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MGMSRv2__4139 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_36 HTH_IclR HTH_38 HTH_11 Arg_repressor
Other DBs
NCBI-ProteinID: CDL01354
UniProt: V6F7C7
Position
4235766..4237259
AA seq 497 aa
MALTPRLDLRQSQSLVMTPQLQQAIKLLQLSNMELTAFIEQELERNPLLEREDAERGEPE
PAPEPDMQPQAEEPPMLDGMTQSSAEDGMDVDYDNLYNNDSASDGIGGGEAFGQWGQSGG
HHGFDDGENNLEQTVAGEISLRDHLIAQLNMDIIDPAEKLIGLHLIEMLDESGYLIGSLD
ELAEKLGCSVAAVEAVLVKVQRFDPIGAFARSLKECLALQLAERNRLDPAMQALLNNLEM
LARRDLVGLMKVCAIDAEDLTEMIGEIKALDPKPALRFDHVVAQPVTPDVLMRRTPDGAW
AVELNSDTLPRVLVNTRYYTQVADQTRKRDDKSYLTERFQSANWLVKSLHQRATTILKVA
AELVRQQDAFFRLGVQHLRPLVLRDIAGAIGMHESTVSRVTSNKYISTPRGIYELKYFFT
QAIGSNDGGDAHSAESVRHRIKALIEAEGKAVLSDDSIVDILKREGIDIARRTVAKYREG
MNIPSSVQRRREKALGG
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggccctgaccccccgcctcgatcttcgtcaaagccagtctctggtgatgacaccgcaa
ttgcagcaggccatcaagctgttgcaattgtccaacatggaactgaccgccttcatcgag
caggaattggagcgcaatccgctgctcgagcgcgaggatgccgaacggggtgaaccggaa
ccggcgccggaaccggacatgcagccccaggcggaagaaccgcccatgctggacggcatg
acccagtcgtccgccgaagacggcatggatgtggattacgacaacctctacaacaacgac
agcgcctctgacggcatcggcggcggcgaggcctttggccagtgggggcaatcgggcggc
catcacggtttcgacgatggcgaaaacaatctggaacagacggtggccggcgagatttcg
ctgcgcgaccacctgatcgcccagttgaacatggacatcatcgatccggcggaaaaactg
atcggcctgcatctgatcgaaatgctggacgaatcgggctatctgatcggcagcttggac
gaactggcggaaaagctgggctgttccgtcgccgctgtcgaggcggtgctggtcaaggtc
cagcgtttcgaccccatcggcgccttcgcccgctcgctcaaggaatgcctagccctgcaa
ctggccgagcgcaaccgcctggacccggccatgcaggcgctgttgaacaacctggaaatg
ctggcgcggcgcgatctggtcgggctgatgaaggtgtgcgccatcgacgccgaggatctg
accgagatgatcggcgagatcaaggcgctggaccccaagccggccctcaggttcgatcac
gtggtggcgcaaccggtgacgcctgacgtgctgatgcgccgcacccccgacggggcttgg
gcggtagagcttaattccgacaccttgccgcgcgttttggtcaacacccgctattacacc
caggtggccgaccagacccgcaaacgcgacgacaaatcctatctgacggaacgctttcaa
tcggcgaattggctggtgaagtcgttgcatcagcgcgccaccaccatcttgaaggtggcg
gcggaactggtgcgccagcaggacgccttcttccgtctcggtgtccagcatctgcggcct
ttggtgctgcgcgacatcgccggggccatcggcatgcacgaaagcacggtcagccgggtg
acctccaacaagtacatctcgacaccgcgcggcatctacgagctcaagtacttctttacc
caggcgatcggctccaatgacggcggcgatgcccattcggccgaatcggtgcgccaccgc
atcaaggcgctgatcgaggccgagggcaaggcggtgctgtccgacgacagcatcgtcgac
atcctgaagcgcgaaggcatcgacatcgcccggcggacggtggcaaaataccgggaaggg
atgaacatcccctcctcggtccagcggcggcgggaaaaggcgttgggcgggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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