KEGG T04111: B586

Mycobacterium haemophilum: B586_19075

Entry

B586_19075        CDS       T04111

Name

(GenBank) exodeoxyribonuclease V subunit beta

K03582

exodeoxyribonuclease V beta subunit [EC:3.1.11.5]

Organism

mhad Mycobacterium haemophilum

Pathway

mhad03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:mhad00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    B586_19075
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mhad03400]
    B586_19075
Enzymes [BR:mhad01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     B586_19075
DNA repair and recombination proteins [BR:mhad03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     B586_19075

SSDB

Motif

Pfam:

UvrD-helicase AAA_19 UvrD_C AAA_30 PDDEXK_1 UvrD_C_2 AAA_22

Other DBs

NCBI-ProteinID:

AKN18905

Position

complement(695661..698954)

AA seq 1097 aa
MERFDLLGPLPAVGSTTVLEASAGTGKTFALAGLVTRFVAEGVATLDQMLLITFSKAASR
ELRERVRSQIVNAIAALDGSASVTPNDLVSHLTSGTAADCAARRQRLRDALTDFDAATIC
TTHQFCQLVLKSLGVAGDTDTGATLVESLDDLVTQIVGDLYLAHFGSQRDEVALRHREAL
ALARAVVADPCAELRPQHPEPQSVAAVRLRFATDVLEQLELRKRRLGIFSYNDLLSRLAN
ALDGPPDSADSAARDRMRRRWAIVMVDEFQDTDPIQWQVIDRAFNGHARLVLIGDPKQAI
YGFRGGDIYTYLLAARTAGVRRTLGVNWRSDKALVDSLHTVLRGAALGDADIVVRDVEAH
VGGHRLHNAPRNAPFRLRVVSRAMFGYDQTRTIAIDALRQHISSDLAADVGALLGSDATF
DGHRIQASDIAVIVESSKDARPCQAALLRAGIPAVYTSDGDVFAADAAKDWLLLLDAFDQ
THRAGLVRAAAATVFFGKTANDLAAGGDALADEVAATLRDWTDQLRERGPAAVFAAAQLA
GMGRRVLAEQGGERTMTDLAHIAELLHAVAHRERLALPALRDWLRRQCDERAGAPERSRR
IDSDAAAVQILTVWGAKGLQFPIVYLPFAFNRHVFIDDIPLYHDGTGVRCLHVGGPGSAD
RRSIEAFSRAEAARNDIRLTYVALTRAQSQVVAWWAPAKDEPNGGLSRLLRGRRLGQAEV
PDSCAPKTISDEEALACFRAWQAAGGPVVEESSVVTAAAVRRPEPPTHLAVRHFHRSIDT
TWRRTSYSALIRGAHDSGVTSEPEMTARDDEIDDAAVAVASGAADGVSSPMSHLPAGATF
GSLVHAVLENTDPFAVDLAAELESQVRTHSGWWPVDAEPATLASALLPMYDTPLGPLTDG
LTLRQIGLRDRLRELDFEIPLTGGDVRASVPAVHLSQVGELVREHLATDDPLARYSDRLL
RDGLGGQPLRGYLAGSIDVVLRLPRQRYFVVDYKTNMLGAAAADYSFPRLTETMLHSDYP
LQALLYTVVLHRFLRWRQPGYQPSQHLGGVLYLFVRGMCGAATPQVDGHPCGVFSWLPPP
ALVVALSDLLDQGRPSA

NT seq 3294 nt +upstreamnt +downstreamnt
atggagcggttcgatctgctcggcccgttgcccgccgtggggtccacgacggtgctcgaa
gccagtgccggcaccggcaagacgttcgcactggccggtctggtaacccgttttgtcgcc
gagggagtggccacactcgaccagatgctgctgatcaccttcagcaaggccgccagccgc
gagctacgtgagcgggtccgcagccagatcgtgaacgctattgctgcactggatggttca
gcatcggtcacgcccaatgacctggtttctcatttgacgagcggcacggccgccgactgt
gcggcgcggcgccaacggctgcgggacgcgctcacggacttcgatgccgccaccatctgc
accacacatcagttctgccagctggtgctcaaatcgcttggggtggccggggataccgac
accggcgctaccctggtggaaagtctcgacgatctggttacccaaatcgtcggcgacctg
tatctggcacacttcggatcgcaacgcgacgaggtggcgttgcgccaccgcgaggcgctg
gcgctggcccgcgcggtggtcgcagacccatgcgccgagctgcgaccgcagcacccggag
ccacaatccgttgccgcggtgcggctgcggttcgccaccgacgtgctcgagcaactcgaa
ctgcgtaaacgccggctcggcatcttcagctacaacgacctgctcagccgcctcgccaat
gcgttggacggtccgccggactccgcggattccgctgcccgcgaccggatgcgccgccgc
tgggcgatcgtgatggtcgacgagttccaggacaccgatccgattcagtggcaggtcatc
gatcgcgcgttcaacgggcacgctcggctggtgctgattggtgaccccaagcaggcgatc
tacggctttcgtggcggcgatatctacacgtatttgttggctgcgcgcacagccggtgtg
cggcggacgttgggggtgaactggcgcagcgacaaggcccttgtcgacagcctgcacacc
gtgttgcgcggggccgcgcttggcgatgccgacatcgtggtgcgcgacgtcgaagctcac
gtcggcgggcatcggctgcacaacgcaccacgcaacgcgccgtttcggcttcgggtcgtc
agccgcgccatgttcggctacgaccagaccagaaccatcgcgatcgatgctttgcgccaa
catatttcgtccgaccttgccgccgacgtcggggccctgctgggcagtgacgcgaccttc
gacggacaccgaatacaggccagcgacatcgcggtgatcgtcgaatcaagcaaggacgcc
cgaccgtgccaagcggcgttgctacgagccggaattcccgccgtctataccagcgacggc
gacgtgttcgccgccgacgcggccaaggactggctacttctgctggacgcgttcgaccag
acgcaccgtgccgggctggtgcgggccgcggcggccacggtgttcttcggcaagaccgcc
aatgacctggccgccggcggcgacgcgctggccgacgaggtggccgccacactgcgggat
tggaccgaccagctgcgcgagcgcggaccggcagcggtctttgcggccgcgcaactggcg
ggcatgggtcgacgagtactggccgagcaaggcggtgagcgcaccatgaccgacctggcg
cacatcgctgaactcctgcatgcggtagcgcatcgcgagcggttggctttgccggcactg
cgcgactggctgcgccgacaatgcgacgagcgcgccggcgcacccgaacgcagccgacgg
atcgatagtgacgcggccgcggtgcagattctgacggtgtggggtgccaagggattacag
ttcccgatcgtctatctgccgttcgcgttcaaccggcacgtcttcatcgacgatatcccg
ctctaccacgacggcaccggcgttcggtgcctgcatgtcggcggcccgggaagcgcggac
cgccgcagcattgaggcgttcagccgggccgaggcggcccgcaacgacatccgactgacc
tacgtagccctgacgcgagcacagtcacaggtggtggcgtggtgggcgcccgcaaaggac
gaaccgaacggcgggctatcccgattattacgcgggcggcgtctcggccaggccgaagtg
ccggatagctgtgcgcccaagacgatctctgatgaggaggcgttggcgtgctttcgggcg
tggcaggccgccggtggcccagtggtcgaagaatcgtcggtggtcaccgctgccgctgtt
cgccggcccgagccgccgacgcacctggcggtgcgccactttcaccgatcaatcgacacc
acctggcggcgcacctcgtattcagcactgatccgcggcgcgcacgactcgggcgtaacc
agcgagccggagatgaccgcacgcgacgacgaaatcgacgacgccgcggtggccgtcgcg
tcaggtgcagccgacggcgtgtcctccccgatgtcacacctgccggctggtgcgacgttc
ggttcgctggtgcatgccgtgttagagaacaccgatcccttcgctgttgacctcgcagca
gagttggaatctcaggtgcggacgcattcagggtggtggccggtggacgccgagccggcc
acgctggcttctgcattgctgccgatgtacgacacgcccctgggcccgctgactgacggg
ctgacgttgcgccagatcgggctgcgggatcggttgcgggagttagacttcgaaataccc
ttgaccggtggcgacgtccgggcttcggtgccggctgttcacctgtcgcaggtgggtgag
ctggtccgtgagcaccttgccaccgatgatccgttggccaggtacagcgaccggctgctg
cgggacggtctcggcggccagccgttgcgcggttatctggccggctcgatcgacgtggtg
ctgcggttgcctcggcagcgttatttcgtggtggactacaaaaccaacatgctgggcgct
gccgccgccgactacagcttcccacggctgaccgagacgatgctgcattcggattacccc
ttgcaggccttgctgtataccgttgtgttgcatcgatttttgcgatggcggcagccggga
taccagccgtcgcagcacctgggtggggtgctgtacctctttgtgcgcggcatgtgcggg
gccgcgaccccacaagtggacggccatccctgcggggtgttcagttggctaccaccgcca
gcgctggtggtggcgttgtcggacttactagaccagggtcgaccatcggcatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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