KEGG   Mannheimia haemolytica USMARC_2286: N220_04385
Entry
N220_04385        CDS       T02758                                 
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
mhal  Mannheimia haemolytica USMARC_2286
Pathway
mhal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mhal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    N220_04385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mhal03400]
    N220_04385
Enzymes [BR:mhal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     N220_04385
DNA repair and recombination proteins [BR:mhal03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     N220_04385
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 ResIII AAA_12 DEAD AAA_25 AAA_11 NEPRO_N
Other DBs
NCBI-ProteinID: AGR74619
Position
864293..867817
AA seq 1174 aa
MKNLNPIQLPLNKSVLIEASAGTGKTFTIANLYLRLLLGIGCNPLTVEQILVVTFTKAAT
EELKNRIRKNIQQCADFLKDQADGLEVESTKSYRNNLDFLAQIYPLIPNIHEALLRLSIA
EREIDTASVFTIHGFCQKMLVQFAFESGVRFDLDLQPNQSDLLKKLSEEVWREQFYPQDL
AITYAVAEQLGTPEYALNAVRRYLSTELPEPNASLNQDIAEHLAQYQQFINEVKSYWKTH
SDELVETIRHDLKHKITLHGGWYRATTFEAGVEVMNQWANSQHNHFPAGLYLFTTEKIAA
GTKKSCEPIDSPHLAKNQAFLTAYKERFENSLSAMLQYQFLIALKAKLAEYKQSHPQRSF
DDLLTMLNQALKNLHTGEALSQKIRAMYPFAMIDEFQDTDLTQYEIFSQIFMAENAENGF
IMIGDPKQSIYKFRGADIFTYLRAAKQADEQFTLGKNWRSLPEVVQAVNNLFSFANDNSP
FLYEDIGFHPVEADSQKGQLVSEQGHFVGYITENSKLDDLAEMCAYQIHQQLEAMAQGKF
GVEKNGEFQSFAAKDIAILVRKGSQAKRIKKALAKRNIKSVYLAESASVFGSEIATELCW
LLQAALNPYHYKALLSALGSTLWGLTAAEIHRYKENEQLWDLKVNQFVEYSNIWKEQGVL
PMLHKIYLEQGIIERLKGLENADRLITDLLHLTEILQETSQALESEAELLRWYEKQVNSP
DFNDEQQLRLESEEELIKIVTIHGSKGLQYPIVWLPFVSQKSEGDTQTALSLYRNSQGAL
DWCLGSEEASFSLQYEAYAEDLRLLYVALTRAESQLNLVLPKEISGWSPLHYLLADGEIP
TGKVPVSDYFSQKRIAANLVEVAGELPFSLWEGEQSSDDYQAKTFSGNIRVVGQITSFTS
LYAQHERFSEGKSERVMDLAQDRDVHIETIEAGYSSETAAFSPFQFPHGIKVGTVLHHFF
EHCQFNEQIDREAVAKVCEQLGLSEEWIEPTALWFERILTTPLAEANFCLKAIDETKRLN
EWQFYLRLKNDKALHQLNALLKQHSPLAKTLPELQLPQLEGFVRGFVDCIVQVEEKFYLI
DYKSNFLGYLPQNYAKEHIQREMGRQRYDLQYLLYTLALHRYLTARLGEKYDYERDFGGV
AYLFLRAMNGENDNGVYFDKPTKQLIEEMDRLFG
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgaaaaacctaaatcctatccaactacctttgaataaatccgttttaatcgaagcgtcg
gcaggtacagggaaaacctttaccattgccaacctgtatttgcgtttattgctcggcatt
ggttgcaacccgttaacggtggaacaaattttggtggtgacatttaccaaagcagcaacc
gaagagttgaaaaaccgtatccgtaaaaatattcagcaatgtgccgactttttaaaagat
caagctgatggtttggaagtggaaagtacaaaatcctatcgaaacaaccttgattttttg
gcacagatttatccgctcattccgaatattcacgaagcattgttacgtttaagtattgcc
gaacgggaaattgataccgccagcgtgtttaccattcacggcttttgtcaaaaaatgctg
gttcagtttgcgtttgagtcgggcgtgcggtttgacttggatttacagccaaaccaaagt
gatctacttaaaaaattaagtgaagaagtctggcgagagcaattctatccgcaagattta
gccatcacttatgcggttgccgaacaacttggtacgccggaatatgccctcaatgcggta
aggcgttatttatctactgaattacctgaaccaaatgcctctttaaatcaagatattgcc
gagcatttggctcaatatcagcagtttattaatgaggtgaaatcctattggaaaacgcat
tcagatgaactggttgaaactatccgccacgatttaaagcataaaattacgctgcacgga
ggttggtatcgagcgaccacttttgaagccggtgtggaagtgatgaaccagtgggctaat
tcgcaacataaccatttcccggcagggctttatttattcactacagagaaaattgcggct
ggcacgaaaaagagctgtgagccgatagattcccctcatcttgcaaaaaatcaggctttt
ttgaccgcttacaaggaacgttttgaaaacagcttgtcagcaatgttgcagtatcaattt
ttaattgctctcaaagcaaaattggcagagtacaaacaatcgcacccacaacgcagtttt
gatgatttactcacaatgctaaaccaagcgttgaaaaatctacacacgggcgaagccttg
tctcagaaaattcgggcgatgtatccttttgcgatgatcgatgagttccaagataccgat
ttaacccaatatgaaattttcagccaaatttttatggcagagaatgcagagaacggcttt
attatgattggcgacccgaaacagtcgatctataaattccgtggggcggatattttcacg
tatttgcgagcagcaaagcaggctgatgaacaattcacattgggcaaaaactggcgttcg
ttgcctgaagtggtgcaagcggtcaataatttgttttcttttgcaaatgataactctccg
tttctttatgaggatattggctttcacccagtggaggctgatagccaaaaaggtcagtta
gttagtgagcaagggcattttgtaggctacatcacggaaaacagtaaattagatgatttg
gctgaaatgtgtgcttatcaaattcatcaacagcttgaggcgatggctcaaggcaaattc
ggagttgaaaaaaacggcgaatttcaatcctttgctgcaaaagatattgcgattttagtc
cgaaaaggttcacaagctaagcgaatcaaaaaggcgttggcaaaacgtaatatcaaatcc
gtctatttagctgaatcagcttctgtatttggttcggaaattgcaacagaattgtgttgg
ttattgcaagccgcactgaatccgtatcattacaaggcattattatcggcgttaggctca
accttgtggggcttaacggcggcagagatccaccgctataaggaaaatgagcaactttgg
gatctgaaagtcaatcagtttgtggaatacagcaacatttggaaagagcagggcgttctg
ccgatgttgcataaaatctacttggagcagggcattatcgaacgtttgaaaggtttggaa
aatgcggatcgcttgattacggatttattgcatttaaccgaaattttgcaggaaacctcg
caagcgttagagtctgaagctgaactgttgcggtggtatgaaaagcaagttaattcgccc
gattttaatgacgagcaacaacttcggttggaaagtgaagaggagctaatcaaaattgtg
acgattcacggctcgaaaggcttgcaatatccaattgtttggttaccttttgtttcacaa
aaaagtgagggagacacgcagacagcattaagtttatatcgcaattctcaaggtgcgctg
gattggtgtttaggctcagaagaggcaagtttttcgctacagtatgaggcttatgcggaa
gatttacgtttgctgtatgtggcattaacccgcgcggaatctcagcttaacttagtgttg
ccgaaagagatttccggctggtctccactccattacttgttagcagacggggaaatacct
acaggaaaagtgcctgtttcagattattttagccaaaaacggattgctgctaatttggtt
gaagtagccggggaattacctttctcactgtgggaaggagaacaatcttcagacgattac
caagcaaaaacctttagtggcaatatccgtgtggttggtcaaattaccagctttacttca
ctttatgcccaacacgagcgttttagtgaagggaaatcagaaagggtaatggatttagcc
caagatcgagatgtacatatagaaaccattgaggcaggttattcaagtgaaactgccgct
ttctcgccattccaattcccacacggtattaaagtgggcacggtgttacatcactttttt
gagcattgccaatttaacgaacaaattgatagagaggctgttgctaaagtatgcgagcaa
ttagggctaagcgaggaatggattgaaccaacagcattatggtttgagcgtattctaact
acccctttggcagaggcaaatttctgcttaaaagcgattgatgaaaccaaacgattaaac
gagtggcaattctatttacgcttaaaaaatgataaagccttacatcaattaaatgcgtta
ttaaagcaacatagccctttagcaaaaactttacctgaattgcaattaccgcaattagaa
ggttttgtgcgaggctttgtagattgtatcgtgcaagtggaggagaaattctacttaatt
gattacaaatcgaatttcttaggctatctgccacaaaattatgcgaaagaacacattcaa
cgggaaatgggcagacaacgctatgatttgcaatatctgctttacactctcgccttacac
cgttatctaactgcccgtttaggtgaaaaatacgattatgaacgagacttcggcggagtg
gcttacttgttcttaagggcaatgaacggcgaaaatgataacggcgtttattttgacaag
ccgactaagcagttgattgaagaaatggatcggttgtttgggtaa

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