KEGG   Mannheimia haemolytica D174: J451_02160
Entry
J451_02160        CDS       T02748                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mhao  Mannheimia haemolytica D174
Brite
KEGG Orthology (KO) [BR:mhao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mhao03016]
    J451_02160
Enzymes [BR:mhao01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     J451_02160
Transfer RNA biogenesis [BR:mhao03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    J451_02160
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C DUF3575 Knl1_RWD_C
Other DBs
NCBI-ProteinID: AGQ40361
Position
complement(425476..426594)
AA seq 372 aa
MESLIHYQWVETNEQLEAVCEQARKTKVVALDTEFIRTRTYYPILGLIQLFDGQQVSLID
PNTISDFSPFVSLLADKNIIKVLHACSEDLEVFEYQFKQLPEPMLDTQVMAAFAGIGISM
GFAKLVSHYLNIELDKGASRTDWLARPLSAEQLQYAAADVWYLLPVYEKLAQALTKSTWQ
SAVAEECVALLKKAKQPINKEKAYKNIANAWRLNREELAILQVLAKWRIEEAQKRNLALN
FVVKEASLVQIAKSCPKHTSSLLEFMHPNEVRIHGKKILWLVEQGKAIESNDYPELIQRL
VDEKGYKYYMQAMLQKLLEIQPLDIVPELVASKRQLNQLFKWYIDGKPSEKIPELLIGWR
KPFGEQLLSVLS
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggagtctttgattcactaccaatgggttgaaacaaatgagcaattagaggccgtatgt
gaacaggccagaaaaacaaaagtagttgccttagatacagagtttatccgtacacgtacc
tattatccgatattgggtttaattcaactctttgatggccaacaggttagccttattgat
ccaaatacgatttctgacttctcgccttttgtgtcattattagccgataaaaatatcata
aaagtattacatgcctgtagtgaggatttagaagtttttgagtatcaatttaagcaattg
ccagagccgatgttggatactcaggtgatggcagcctttgccggcattggtatttcgatg
gggtttgcaaaattggtttcccactacttaaatattgaactagacaaaggcgcttcccga
accgattggcttgccagaccgctaagcgctgaacaattacaatatgcggcagctgatgtt
tggtatttattgccagtttatgagaaattggcacaagcattaacaaaaagcacttggcaa
agtgctgtagcagaggagtgtgtcgctttgttgaagaaagcgaaacagcctatcaataag
gaaaaagcctataaaaatattgccaatgcttggcgattgaatcgggaagagttagccata
ttacaagtattagcgaaatggcggattgaagaagcacaaaagcgcaatcttgccttaaat
tttgtcgtgaaggaggcaagtttagttcaaatcgcaaaaagctgtcctaaacacacttct
tcgctgttagaatttatgcacccaaatgaagtcagaattcacggaaaaaaaatactatgg
ttggttgagcaaggaaaagcaatagaatcgaatgattatcctgaactcattcagcgcttg
gtggatgaaaagggttataaatattatatgcaagcgatgttgcaaaaattattagaaatt
caaccgcttgatatcgtaccggagttggttgcaagtaaacgtcaattaaatcagctattt
aaatggtatattgatggaaaaccatcagaaaaaattcctgaattattaatcggttggcga
aaaccttttggtgaacagctgctatcggttttatcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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