KEGG   Mannheimia haemolytica 89010807N: WC39_03030
Entry
WC39_03030        CDS       T03749                                 
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
mhaq  Mannheimia haemolytica 89010807N
Pathway
mhaq03420  Nucleotide excision repair
mhaq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mhaq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    WC39_03030 (uvrD)
   03430 Mismatch repair
    WC39_03030 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mhaq03400]
    WC39_03030 (uvrD)
Enzymes [BR:mhaq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     WC39_03030 (uvrD)
DNA repair and recombination proteins [BR:mhaq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     WC39_03030 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     WC39_03030 (uvrD)
SSDB
Motif
Pfam: UvrD_C UvrD-helicase AAA_19 PcrA_UvrD_tudor UvrD_C_2 Viral_helicase1 AAA_30 AAA_12 DNA_pol3_beta
Other DBs
NCBI-ProteinID: AKA10702
UniProt: A0A547ESQ8
Position
584321..586519
AA seq 732 aa
MDFSLLLDGLNDKQREAVAAPIGNYLVLAGAGSGKTRVLTHRIAWLIGVENVPESNILAV
TFTNKAAAEMRHRIEYTLSQSGDNRLFGMWVGTFHSIANRLLRSHYLDADLPQDFQIMDT
EDQQRLLKRLLKLHNIDEKHFPPKHVAWYINAQKDKGKRAKDIDHYNDPNEKKLVEIYQI
YQDACDRAGLLDFAELLIRAYELFKTKSTILQRYQQRFQQILIDEFQDTNNIQYDLIRLL
AGDVGKVMIVGDDDQSIYGWRGAQVENIQRFLNDYDNAQTIRLEQNYRSTGNILSCANEL
IANNDNRLGKNLWTDSGDGEPVDIYCAFNELDEARFVASQIKQWKEDEGDLAECAVLYRS
NSQSRVIEEALIQANIPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVINTPTR
GIGDRTLDTLRQITRGRQITLWQAIQVAVQEEQLSGRATSSLLRFVELINALDQETEQMS
LAEQTDFVIKKSGLYEMYKQEKGEKGEVRIENLEELVTATKQFVKPDEAEELTDLTAFLT
HASLEAGEAQASQHEDYVELMTLHSAKGLEFPRVFIVGVEEGIFPSGMSFDEGRLQEERR
LAYVGITRAKKKLTISYAESRRLYGKEERHVPSRFIAELPEEHIREVRLRGSINRAASFN
QANSFAKNPTKTTASFLNDDTWKMGQKVNHAKFGQGTIINVEGSGEATRLQVAFVGNGIK
WLIAKMANLERI
NT seq 2199 nt   +upstreamnt  +downstreamnt
atggatttctcattattattagacggtttaaatgacaagcagagggaggcggttgctgcc
ccgattggtaattatttagtgttagccggggcgggttcgggcaaaactcgggttttaacc
catcgcattgcgtggctgattggggtggaaaatgtgccggaatccaatattctggctgtt
acctttaccaataaagcggcggcggaaatgcgacatcggattgagtacactctttcccaa
tcgggcgataatcgattgttcggaatgtgggttggtactttccacagcattgccaaccgc
ttacttcgttcccactatttagatgcggatttaccgcaagatttccaaattatggatacc
gaagatcagcaacgtttactcaaacgtttactgaaactgcataatattgatgagaaacat
tttccgccaaaacacgttgcgtggtatatcaacgcccaaaaagataaaggcaaacgggca
aaagatattgatcactataacgatccgaatgaaaaaaaattggtggagatttaccaaatc
tatcaagatgcctgcgaccgagccggtttgttagattttgccgagctgttgattcgggct
tatgaactattcaaaaccaaatcaaccattttgcaacgttatcaacaacgttttcagcaa
attttgattgatgagtttcaagacaccaacaatattcagtacgacttaattcgtttgctt
gccggcgatgtcggcaaagtgatgattgtcggcgatgatgatcagtctatttatggttgg
cgtggggcacaggttgagaatatccaacgtttcttaaatgattatgacaacgctcaaacc
attcgcttagagcaaaattaccgctctaccggcaacattttaagctgtgccaatgaatta
attgccaataacgataaccgcttaggcaaaaatttatggacagatagcggtgatggcgag
cctgtggatatttactgtgccttcaacgaacttgatgaagctcgctttgttgcctcgcaa
atcaagcaatggaaagaagacgagggtgatttggcggaatgtgcggtgttgtatcgcagc
aacagccaatctcgtgtgattgaggaagctttaattcaagcgaatattccttatcgcatt
tacggtggaatgcgattctttgaacgccaagaaattaaagatgctctggcttatttacgc
ttaatcgccaatcgtcaagacgatgcggcgtttgaacgggtgatcaacacgccaaccaga
ggcattggcgatcgtaccttagacacactccgtcaaattacccgtggtcgccaaattacg
ctgtggcaagcaattcaagtggcggtgcaagaagaacaactttcagggcgtgccacttct
tccttattgcgttttgtagagctgattaatgctcttgatcaagaaaccgagcagatgtcg
cttgccgaacaaaccgattttgtgattaaaaaatcgggtttatatgaaatgtataagcaa
gaaaaaggcgaaaagggcgaagttcggattgaaaacttagaagagttagttaccgcaact
aagcagtttgtgaaacctgacgaagcggaagagctgaccgatcttaccgcatttttaacc
cacgcctcacttgaggctggagaagcccaagcctcgcaacacgaagattatgtcgaactg
atgacgctacattccgccaaaggattggagtttccccgtgtgtttattgtgggcgtggaa
gaagggattttcccaagcggaatgagctttgatgaaggcaggttgcaagaagaacgccgt
ttggcttatgtcggcataacccgagctaagaaaaaactgacgattagctatgccgaatca
agacggctttatggtaaagaagaacgccacgttccgtctcgctttattgctgaattacct
gaagagcatattcgagaagtgagattgagaggctcaattaaccgagcggcaagttttaac
caagctaattcatttgcaaaaaatccgacaaaaacgaccgcttcctttttaaacgatgat
acttggaaaatggggcagaaagtgaaccacgctaaatttggacaaggcacgattattaat
gtggagggctcaggtgaagccacccgtttgcaagttgcctttgtcggcaacggcattaaa
tggctgattgccaaaatggcaaatttagagaggatttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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