KEGG   Mannheimia haemolytica 89010807N: WC39_07285
Entry
WC39_07285        CDS       T03749                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
mhaq  Mannheimia haemolytica 89010807N
Brite
KEGG Orthology (KO) [BR:mhaq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mhaq03032]
    WC39_07285
   03400 DNA repair and recombination proteins [BR:mhaq03400]
    WC39_07285
Enzymes [BR:mhaq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     WC39_07285
DNA replication proteins [BR:mhaq03032]
 Prokaryotic type
  DNA Topoisomerases
   WC39_07285
DNA repair and recombination proteins [BR:mhaq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      WC39_07285
SSDB
Motif
Pfam: Topoisom_bac Topo_Zn_Ribbon TOP1_ZnF Toprim zf-C4_Topoisom Zn_Tnp_IS1595 Toprim_4
Other DBs
NCBI-ProteinID: AKA11486
UniProt: A0A547EET5
Position
complement(1435004..1437610)
AA seq 868 aa
MGKSLVIVESPAKAKKINQYLGSNYVVKSSVGHIRDLPKSGSDEKTEKAKPISTKGLTAA
EKAKIKAEKERVALVKRMGIDPYNGWKANYQILPDKEKVVSELKSLAKKADHIYLATDLD
REGEAIAWHLREIIGGDDSRFSRVVFNEITKDAIKKAFDDPQPLNIDRVNSQQTRRFLDR
VVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQSEEFWTILANTQINRKKL
PLELTTYKGKKFSASNEAEANVAVRALEQSDFIVSNIEAKETSSRAAAPFITSSLQRAAS
TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSREALAMARGYIQDNFGANYLPEKANV
YRSKDNAQEAHEAIRPSDVNVKMADLKGMDKDAERLYDLIWRRFLACQMLPARYDSTAVT
VSAGDYELKANGRVLRFDGWTKVLPVQGKNPEDQELPAVELHQKLTLDEIVPSQHFTKPP
ARFNEASLVAELEERKIGRPSTYASIISTIQERGYVRTENKRFYVEKIGEVVTDRLNESF
KDLMNYDFTANMEEVLDQIAEGSKNWKEELNTFFKHFSEELSQAELDELEGGMKPNSLVP
TDIDCPTCGRKMAIRTASTGVFLGCTGYALPPKERCKTTMNLIPEAEFFNVLDSDSETKA
LMARKRCPKCDSAMDSYVIDAERKLHVCGNNPNCDGHIIEQGSFKIKGYDGPVVECDKCG
SDMHLKLGRFGKYMGCTSCDNTRKILKNGEVAPPKEDPIAFPELKCEKADAYFVLRDGAS
GVFMSAHNFPKVRESRAPKVVELAQYRERLPEKLQYLADAPQQDPEGNEAIIRFSRKEKR
QYVTSEKNGKATKWIVDYLDGKWVERKK
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgggaaaatcactagttattgtggagtctccggctaaggcaaaaaaaattaaccaatat
cttggtagtaattatgtggtgaaatcgagtgtggggcatattcgtgatttaccgaaaagt
ggtagtgatgaaaaaacggaaaaagcgaaaccgatttcaaccaaagggctgaccgctgcc
gaaaaagctaaaatcaaagcagaaaaagagcgtgttgcattggttaaacgtatgggtatc
gacccctataatggctggaaagctaactatcagattttgccggataaagagaaagtggtt
tccgagctaaaatcgttggcaaagaaagcagatcatatctatctggcaaccgacttggat
agagaaggggaggcgattgcgtggcatttgcgtgaaatcattggtggtgatgacagccgt
tttagccgagtggtatttaatgaaatcaccaaagatgcgatcaaaaaggcttttgacgat
ccgcaaccgctcaatattgaccgtgtaaattcccagcaaacccgccgctttttagaccgt
gtagtgggctttatggtgtcgccattattatggaaaaaagtagctcgtggtttatcggca
gggcgtgtgcaatcggttgccgtaaaattactggttgagcgtgagcgtgaaatcaaggcg
ttccaaagcgaggagttttggactattcttgccaatacgcaaattaatcgtaaaaaatta
ccgcttgaattaactacttataaaggtaaaaaattctcggcaagcaatgaggctgaagca
aatgttgcagtgcgtgctttggagcagagcgattttattgtttctaatattgaagccaaa
gaaaccagctctcgagctgctgcaccatttattacctcatcgttacaacgtgccgctagc
actcgtttaggttttggggttaaaaagacgatgatgttagcccaacggttatatgaagcg
ggttacatcacctatatgcgtactgattcaaccaaccttagccgtgaagcattagcaatg
gctcgaggttatattcaggataatttcggggcgaattatttgccggaaaaagcaaatgtg
tatcgcagtaaagataatgcccaagaagctcacgaagccattcgcccgtcggatgtgaat
gtcaaaatggcggatttaaaaggaatggataaagatgccgagcgtttatacgatttaatt
tggcgtcgtttcttggcgtgtcaaatgttgcctgctcgttatgattctaccgcagtcaca
gtgtctgccggagactatgaactcaaagcaaacgggcgtgtactgcgttttgacggctgg
acgaaagtactgccggtgcaaggcaaaaatccggaagatcaggaattaccggcggttgaa
ctgcatcaaaaattaacgcttgatgaaattgtgccaagtcagcattttactaaaccgcct
gcacgttttaatgaggcgtctttggttgctgagttagaagagcgaaaaattggccgccct
tcaacctatgcttcaattatttcgacgattcaagaacgtggctatgttcgcaccgaaaac
aagcgtttttatgtggaaaaaatcggtgaagtagtgacggatcgcctcaacgaatcattc
aaagatttaatgaattatgatttcactgccaatatggaagaggtgctcgaccaaattgca
gaggggtctaaaaattggaaagaagagttgaatactttctttaaacatttctctgaagag
ttgagccaagcagaattagatgaacttgaaggcggaatgaaaccaaacagccttgtgcca
accgatattgattgcccgacttgtggacgaaaaatggcaattcgcaccgcttccacaggg
gtatttttaggttgcaccggctatgctttaccgccaaaagagcgttgcaaaacgacaatg
aatttaattccagaggcggaatttttcaatgtgttagattcggattctgaaaccaaagcc
ctaatggctcgcaagcgttgcccgaaatgcgattcggcaatggatagttatgtgattgat
gctgaacgtaaattacacgtttgtggtaataatccaaattgtgatggtcatattattgag
caaggttccttcaaaattaaaggctatgacggacctgtagtggaatgcgataaatgcggt
tcagatatgcacttaaaactgggtcgtttcggcaaatatatgggctgcacaagctgcgat
aacacccgtaaaattctgaaaaacggggaagttgctccgccaaaagaagatcctattgct
tttcctgaattaaaatgtgaaaaagccgatgcctattttgtattaagagacggagcaagt
ggggtgtttatgtcagctcataacttcccgaaagtgcgtgaaagccgtgcaccaaaagtg
gtagagttagctcaatatcgtgaacgtttgccggagaaattgcagtatcttgccgatgct
ccgcagcaagatccggaaggaaacgaggcaattatccgttttagtcgtaaagagaaacgc
caatatgtgacttctgagaaaaacggcaaagccaccaaatggattgttgattatctagac
ggtaaatgggttgagcgtaagaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system