KEGG   Mannheimia haemolytica USDA-ARS-USMARC-184: B824_4980
Entry
B824_4980         CDS       T03786                                 
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
mhat  Mannheimia haemolytica USDA-ARS-USMARC-184
Brite
KEGG Orthology (KO) [BR:mhat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mhat03016]
    B824_4980
Enzymes [BR:mhat01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     B824_4980
Transfer RNA biogenesis [BR:mhat03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    B824_4980
 Prokaryotic type
    B824_4980
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AJE07293
Position
389777..390796
AA seq 339 aa
MKLNYLYSPPQAVGRLKAEYADFIVREELGYELAGEGEFVAVKIRKTNASTLFVGEKLAK
FVGISEREMSYAGLKDRHAVTEQWFCLHLAGKETPDFSAFECEGVEVLEVTRHNRKIRVG
SLAGNHFELLLRDVAESEELIYRLQQLQAVGFPNYFTEQRFGRDGHNLTQALRWANGEIS
VKDRKKRSFYLSAARSEVFNLVVSQRINDCLTQKILENDYVQLAGSNSFFCVKSDEIAET
QARLAQQDLLLTAPLIGERSLELECNPAEKAIIEQHAQLVALMQKERMAAARRAVLCKPQ
NLEWQFEQEGLRLKFFLDSGSYATALVRELILLTEESEA
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgaaactgaattatttatactctcctcctcaagctgttgggcgactaaaagccgaatat
gcagactttattgtgcgtgaagaactgggctacgaactagccggcgaaggggaatttgtg
gcggttaaaatccgcaaaaccaacgccagcacgctgtttgtgggggaaaagttagccaaa
tttgtcggtatttccgagcgtgaaatgagttatgcaggcttaaaggaccgccacgccgtg
actgagcaatggttctgcttacacttggcaggcaaagaaacgcccgatttctccgccttt
gaatgcgaaggcgtggaagtgctggaagtgacccgccacaaccgcaaaattcgtgttggt
tcgctcgccggcaatcattttgaattattgctacgtgatgtagcagaaagcgaagagttg
atttaccgtttgcaacagttgcaagcggtcggatttcccaattattttaccgaacaacgt
ttcgggcgagacggacataacctgactcaagccttgcgttgggcaaacggggaaattagc
gtgaaagatcgcaaaaaacgcagtttctacctttccgctgcccgctcggaagtgtttaat
ttagtggtttcacagcggattaatgactgcttaacccaaaaaatcttggagaatgattac
gttcaacttgccggctctaacagctttttctgcgtgaaatcggacgaaattgccgaaact
caagcccgtttagcacagcaagatctacttctcaccgctccgctgataggcgaaagatcg
cttgaattagaatgcaatcctgctgaaaaagccatcatagaacaacacgctcaattggtt
gccttaatgcaaaaagagcgtatggcagccgctcggcgagcagtgctttgtaagccacaa
aatctggaatggcaatttgaacaagaagggctacggttaaaattctttttagattcaggc
agttatgccactgcactggtgcgagagttaattctgcttaccgaagagagcgaagcttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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