KEGG   Methylocystis heyeri: H2LOC_020500
Entry
H2LOC_020500      CDS       T06290                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mhey  Methylocystis heyeri
Brite
KEGG Orthology (KO) [BR:mhey00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mhey03016]
    H2LOC_020500
Enzymes [BR:mhey01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     H2LOC_020500
Transfer RNA biogenesis [BR:mhey03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    H2LOC_020500
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: QGM47866
UniProt: A0A6B8KHM2
Position
complement(4539469..4540083)
AA seq 204 aa
MTVRLHKGDLPDDYRWGPIVAIDTETLGLNPLRDRLCLVQLSNGDGDAELVQIARGQSRA
PNLERLLSDPETLKLFHFARFDLAILGQTFGAIPQPVYCTKIASRLTRTYTDRHGLKDLV
RELLGVEISKQQQSSDWGAETLTDAQQAYAASDVLYLHQLKSRLDAMLEREARMEMAAAC
FEFLPARARLDLAGWPETDIFAHS
NT seq 615 nt   +upstreamnt  +downstreamnt
atgactgttcgactgcataaaggcgacctccccgacgactatcgctgggggccgatcgtc
gccatcgacaccgagaccctgggcctcaatccgctgcgcgaccggctatgcctggtgcag
ctttccaatggcgacggcgacgccgagctggtccagatcgccaggggacagagccgcgcg
cccaatctcgagcgccttctgagcgaccccgagaccctgaagcttttccacttcgcccgc
ttcgacctcgccattctgggccagaccttcggcgcgatcccgcaacccgtctattgcacc
aagatcgcctccaggctgacccgcacctataccgaccgccacgggctcaaagacctggtg
cgcgagcttttgggcgtggaaatctccaagcagcagcagtcgtcggactggggcgcggag
acactgaccgacgcgcagcaggcctatgccgcctcggatgtcctttatctgcatcagctc
aagagccgcctcgacgccatgctcgaacgcgaagcgcgcatggagatggcggccgcctgc
ttcgagttcctgcccgcgcgggcgcgtcttgatctcgcaggttggccggaaaccgatatt
ttcgcccattcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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