KEGG   Metamycoplasma hominis ATCC 23114: MHO_2670
Entry
MHO_2670          CDS       T01122                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' chain
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
mho  Metamycoplasma hominis ATCC 23114
Pathway
mho03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mho00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MHO_2670 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mho03021]
    MHO_2670 (rpoC)
   03400 DNA repair and recombination proteins [BR:mho03400]
    MHO_2670 (rpoC)
Enzymes [BR:mho01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MHO_2670 (rpoC)
Transcription machinery [BR:mho03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MHO_2670 (rpoC)
DNA repair and recombination proteins [BR:mho03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MHO_2670 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: CAX37401
UniProt: D1J854
Position
complement(317942..322348)
AA seq 1468 aa
MKKISKYESLDEEKISKISLALATPQDVETWSHGEVTKPETINYKSYKPERGGLFDEIIF
GPMIDYRCPVCGFKYKKVNEGSYCTRTELCKQEHVQILPKIARRTHMGHIKLNSPVVHFW
YFKVDHSIIYKLLGLKSSNGSDVVKREELENLIYYKNHIVLEDGGLKSLPKNQIIEINEA
AIIYRNALEELLERFQEGTEEYDDIKETLDSLIEKATSKIGQEYGIDFYELNEVIEHYSD
AKIGTGALAIEYLLKNINLAEEKQKVTDEINRLNAEEINNPERFATTAKQTREKLYKRLQ
VINAFIESKQDPTSMLIYNLPVIPADLRPLIQLDGGRHSTSDINELYRRVIIRNNRLQQW
QEKDAPTLVIQNELRMIQEAVDALIDNQRRTPNSVLSKDNCPFKSISDALTGKKGRFRQN
LLGKRVDYSGRSVIAVGPSLKMHQCGIPREMAAKLFEPWIIERLIEKEVATTIKSAKKII
EDQNPVIWPHVAEAIKGRLVLLNRAPTLHRLSIQAFEPVLVRGKAIRLHPLVCTPFNADF
DGDQMAVHVPVSEQALLESRELMLANKNILGPKDGEPIINPSQDMVLGIYYLTIEEPGAK
GEGRVFDNYEHMLRALENKVVTLHTRIALPASEVKTPKLIFPFDGPQYIISTVGKFIFNN
IFPKTFPFIYDNKVAKANSLEDYNQTFNAKYVVQAGTNIPEYIKNMPIEEAFNKKNISKI
IRYVFDKYVAQISMSDIAEVINNLTESSDANDSIIQFLHVKNYENRKIDYEHAMLLAQFT
SQEKQKIEMLNPARANGQEVPLSPAEKAEILDTVWFRYTNIVASILDSIKQLGFDYSTYS
GISISFSDILETNKKQEYIAQGDEYIAKLKHYYEQCWITDDDRYSLTIKKWAEVKDLIQE
DLQKIIKENPQNPVITMINSGARGNISNYVQLAGMRGLMANNTKTTKADAKNDRVVRSTV
EVPVKSSFIEGLTAFEFYSSTHGARKGLTDTALNTAKSGYLTRRLVDVAQNIVVREENCG
TDYGYKARNIVDTKTKQIIVPLKERIVGRFANKPVVTSAGIEICSRNELITEKIAQRIIA
SGIEEVEIRSILGCNTRNGVCKMCFGKDLATNRIVNIGEAVGIIAAQSIGEPGTQLTMRT
FHTGGVAGVEDITGGFTRLIELIDAHEQPWGRPAVISPYKGIVTKIEVDEKDNTNYLVTI
ESKGSSNTTVSHKIFVNTTKKLRVQEGDELRIGQKISEGPIILKELLALTDVITVQNYLL
KEIQRIYRIQGIAISDKYIEIIIRQMMSKLVISEPGDSKFFAGAIVDIFDYQEENAILLS
KGLKPAYGKVVIKGAKQVPLLSDSFLAAASYQETSKILVHAAISSRIDNLSGLKENIILG
KKIPSGTALFPFEEHSKYDIKPSINYFTTTPIDGTEISEPIDIDSVVNTAQEYDNDKQSV
EEDYSPNDEELVAEEETFDDEENQNDFE
NT seq 4407 nt   +upstreamnt  +downstreamnt
atgaaaaaaatttcaaaatacgaatcattagatgaagaaaaaatttcaaaaatttcatta
gcattagcaactcctcaagatgttgaaacttggtctcatggtgaagttactaagccagaa
actattaactataaatcatataagccagaacgtggtggattatttgatgaaataattttt
ggaccaatgattgattatcgttgccctgtatgtggtttcaaatacaaaaaagttaatgaa
ggaagctattgtacaagaactgaattatgtaaacaagaacatgttcaaatattgcctaaa
atagcacgtagaacccatatgggacacataaaactaaatagtccagttgttcacttttga
tatttcaaagttgatcactcaattatttataaattgcttggtttaaaatcttcaaatggt
tctgacgttgttaaacgtgaagaactagaaaatttaatttattacaaaaatcatattgtt
ctagaagatggtggcttaaaatcattacctaaaaatcaaattattgaaatcaatgaagca
gcaatcatttaccgcaatgctctagaagaattacttgaaagatttcaagaaggcacagaa
gaatatgatgatattaaagaaaccctagattctttaattgaaaaagcaacatcaaaaatc
ggccaagaatatggaattgatttttatgaattaaacgaagtaattgaacattattcagat
gctaaaataggtactggtgctttagctattgaatatttattaaaaaatataaatttagct
gaagaaaagcaaaaagtaactgatgaaattaatcgtttaaatgcagaagaaattaataat
cctgaacgttttgccacaactgcaaaacaaacaagagaaaaactttataaacgtttacaa
gtaattaatgcatttattgaatctaaacaagatccaactagcatgttaatttataatttg
cctgttattccagcagatttaagacctttaattcaattagatggtggtagacactcaact
agtgatattaatgaattgtatcgtagagtaattattagaaataatagattgcaacaatga
caagaaaaagatgcccctacattggttattcaaaacgaactaagaatgattcaagaagca
gtagatgctttaattgataaccaaagaagaacacctaactctgttttatcaaaagacaat
tgtccatttaaatcaatttcagatgcattaactggtaaaaaaggtcgttttagacaaaat
ttactaggaaaacgtgttgactattctggacgttcagttattgccgtagggccttcatta
aaaatgcaccaatgtggtataccaagagaaatggctgctaaattatttgaaccatgaata
attgaaaggctaattgaaaaagaagtagctacaacaattaaaagtgctaaaaaaattatt
gaagaccaaaacccagtaatttgacctcatgttgctgaagcaattaagggcagactagta
ttgttaaaccgtgcacctacattacaccgtttatctattcaagcctttgaacctgtttta
gtaaggggcaaggctattagattacacccattagtatgtactccatttaatgctgacttc
gatggtgaccaaatggctgttcacgttcctgtttctgaacaagcattgcttgaaagtcgt
gaattaatgttggctaataaaaacattctaggacctaaagatggtgaacctattattaac
ccttctcaagatatggttttaggtatttattatctaactattgaagaaccaggggctaaa
ggtgaaggacgtgtttttgataactatgaacacatgcttagagcattagaaaataaagta
gttacattgcacactagaatagcattacctgcttcagaagttaaaactccaaaacttatt
ttcccatttgatggtcctcaatatataatttcaacagtaggtaaatttatttttaataat
atattccctaaaacatttccatttatttacgacaataaagttgctaaggcaaattcattg
gaagattataatcaaacattcaatgcaaaatatgttgttcaagcaggtactaatattcct
gaatatatcaaaaatatgcctattgaagaagcatttaacaaaaagaatatttctaaaata
atacgttatgtttttgataaatatgttgctcaaatttcaatgtctgatattgcagaagtt
attaataatttaactgaatcaagtgatgctaatgattcaataattcaattcttgcatgtt
aaaaattatgaaaatagaaaaattgattatgaacatgcaatgttgctagctcaatttaca
agtcaagaaaagcaaaagattgaaatgttaaatcctgctagggcaaatggacaagaagtt
ccacttagtccagctgaaaaagcagaaattctagacactgtatgatttagatatacaaac
attgttgcttcaatattggatagtattaaacaattaggttttgactattcaacatattct
ggaatttctatttcgtttagtgatattctagaaactaataaaaagcaagaatatattgct
caaggtgatgaatatattgctaaattaaaacactactatgaacaatgttgaataactgat
gatgatcgttactctttaactattaaaaaatgagcagaagttaaggatttaattcaagaa
gacctacaaaaaataattaaagaaaatcctcaaaacccagttattaccatgattaattca
ggtgctcgtggtaacatttctaactatgttcaattagcaggtatgcgtggattgatggct
aacaatactaaaactactaaggccgatgctaaaaacgaccgtgttgttagatcaacagtt
gaagttcctgttaagtcttcatttattgaaggacttactgcatttgaattctattcatca
actcacggtgctagaaaaggtttaaccgatactgccttgaacactgcaaaatctggttat
ttaacaagacgtttagttgatgttgctcaaaatattgttgttagagaagaaaactgtggt
actgactatggttataaagcaagaaacatagttgatacaaaaactaaacaaattattgtt
cctttgaaagaaagaattgttggaagatttgcaaacaaacctgttgttacaagtgcgggt
atagaaatttgttctagaaatgaattaattactgaaaaaattgctcaacgaataatagca
agcggtattgaagaagtcgaaattagatcaatcttaggctgcaatacacgtaacggtgta
tgtaagatgtgttttggtaaagaccttgcaacaaatagaattgttaatatcggtgaagca
gtaggtattattgcagctcaatctattggggaaccaggaactcaattaactatgcgtaca
ttccacactggtggtgttgccggggttgaagatattactggtggtttcactagattgatt
gaattaattgatgcccacgaacaaccatgaggacgtcctgccgttatttcaccatataaa
ggtattgttacaaagattgaagttgatgaaaaagacaatacaaactatttagtaacaatt
gaaagcaaaggatcttcaaacacaacagtttctcacaaaatttttgttaatacaaccaaa
aaattacgtgttcaagaaggcgatgaattaagaattggtcaaaagatttctgaaggacca
attatcttaaaagaattattagctttaacagacgtaattactgttcaaaattatttattg
aaagaaattcaaagaatttatcgtattcaaggtattgcaattagcgataagtatattgaa
attataattcgtcaaatgatgtctaaattagtaatttctgaaccaggagattctaaattc
ttcgctggtgctattgtagatatttttgactatcaagaagaaaatgctattctactttca
aaaggtttgaagccagcatatggtaaagttgttattaaaggtgcaaaacaagttccattg
ttatctgattcattccttgccgctgcttcttatcaagaaacaagcaagatattagttcac
gccgctatttcatcaagaattgacaatttatctggcttaaaagaaaatattattcttggt
aaaaagattccatcaggaacagcattattcccatttgaagaacattcaaaatatgatata
aaaccatcaattaattactttacaacaactcctattgacggcacagaaatttctgaacct
attgatattgattcagttgttaatacagcgcaagaatatgacaatgataaacaatcagtt
gaagaagattattctccaaacgacgaagaacttgttgccgaagaagaaacatttgatgat
gaagaaaatcaaaacgattttgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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