KEGG T02523: D650

Mannheimia haemolytica USDA-ARS-USMARC-183: D650_13910

Entry

D650_13910        CDS       T02523

Symbol

gyrB

Name

(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

mhq Mannheimia haemolytica USDA-ARS-USMARC-183

Brite

KEGG Orthology (KO) [BR:mhq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mhq03032]
    D650_13910 (gyrB)
   03400 DNA repair and recombination proteins [BR:mhq03400]
    D650_13910 (gyrB)
Enzymes [BR:mhq01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     D650_13910 (gyrB)
DNA replication proteins [BR:mhq03032]
Prokaryotic type
  DNA Topoisomerases
   D650_13910 (gyrB)
DNA repair and recombination proteins [BR:mhq03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      D650_13910 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 Toprim_4

Other DBs

NCBI-ProteinID:

AGI32660

Position

1066693..1069125

AA seq 810 aa
MSEQTQATSYDSSSIKVLRGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGH
CKDIIVTIHSDNSVSVQDDGRGIPVGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGL
HGVGVSVVNALSSKLQLTIRREGHVHEQFYSLGEPDAPLAIIGNTEKTGTSVRFWPSLDI
FKNKTEFEYKILSKRLRELSFLNSGVSIKLIDERDGKEEHFKYEGGIKAYVEYLNEGKTH
IHNTPFYLTTEKDGIGVEISLQWNDSYNENVYCFTNNIPQRDGGTHLAGFRGALTRALKN
YMDNSGVLKKADANIDASGDDAREGLVAVISVKVPDPKFSSQTKDKLVSSEVRGAVESSM
NEALSDYLAENPDDAKNIVTKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCQEK
DPALSELYLVEGDSAGGSAKQGRDRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITA
LGTGIGRDDYNLEKLRYHKIIIMTDADVDGAHIRTLLLTFFYRQMPELIENGYIYIAQPP
LYKVKKGKQERYIQDNDEMSQYEIDIALEGAGLYVSEDAPALSGVALENLIAQYNGVQKL
IERLSRRYPTLLLNELIYSKPLSVEFAKNQANMTAWSEQFVATLMAKEVGGSFYRINTLF
NEERQIYEPEIIVTTHGMDSTYRLDYNFINGNEYARIVALGNELNDLLSDSAYVVRGERR
QEISSFAEALDWLVKESRKGLTIQRYKGLGEMNPEQLWETTMDPVARKMLQVNITDAIAA
DKLFSTLMGDEVEPRRDFIETNALYAQLDI

NT seq 2433 nt +upstreamnt +downstreamnt
atgtctgaacaaactcaagcaacaagttatgattcttccagtattaaggtgttacgcggc
ttagatgcggtgcgtaaacgcccgggaatgtatatcggcgataccgatgacggtacgggc
ttacaccatatggtgtttgaggtggttgataatgcgattgacgaagcattagccgggcat
tgtaaagacattattgtcacaattcattccgataattcggtttctgtgcaagatgacggt
cgtggaattccggtggggattcacccggaagaaggcgtttcggcagcagaagtcattatg
actgttcttcacgcaggcggtaaatttgacgataactcctataaggtttccggcggtttg
cacggtgtgggcgtatcggtggtgaatgcactttcctctaaattacaactcactattcgc
cgtgaaggacacgttcacgagcaattctatagcttaggtgagcctgatgcacctttagcg
attatcggcaataccgaaaaaacggggacgtcggttcgtttctggccaagtttggatatt
ttcaaaaataaaaccgaatttgaatataaaattctgtctaaacgcttgcgtgaactatca
tttttgaattcaggcgtttcgattaaattaattgatgaacgagacggcaaagaagagcat
tttaaatatgagggcggtattaaagcctatgttgagtatttaaacgaaggcaaaactcat
attcacaatacgccattctatttgaccactgagaaagacggcattggcgtggaaatttcc
ctacagtggaatgacagttacaacgaaaatgtgtactgctttaccaataatattccacag
cgtgatggcggtacgcacttagccggtttccgtggggcattaactcgtgcgttgaaaaac
tatatggataacagcggggtattgaaaaaagccgatgcgaacattgatgcctcaggtgat
gatgcccgtgaaggtttagtagcggtgatttcggtgaaagtgccggatccgaaattctcc
tcacaaaccaaagataaattggtgtcgtcagaagtgcgtggagcagtggaaagctcaatg
aatgaggctttatccgactatttagccgaaaatccggacgatgcaaaaaatatcgttacc
aaaattattgatgcagcccgtgcaagagaagcagctcgtaaagcccgtgaaatgacccgc
cgtaaaggggcgttagatttaggcggcttaccgggtaaattagctgattgtcaggaaaaa
gatccggcgttatcggagctttacttggtggagggtgactctgccggtggctcggcaaaa
caagggcgtgaccgtaaaaaccaagcgattttgccgttaaaagggaaaattctgaacgtg
gaaaaagcccgctttgataaaatgctttcttcacaagaagtagcaaccttgattaccgct
ttaggcacaggcatcgggcgtgatgattataatttggaaaaattacgttaccacaaaatc
attattatgaccgatgcggacgtggatggtgcacatattcgtacgcttttattaactttc
ttctaccgtcaaatgccggagctgattgaaaacggctatatttatattgcacagccaccg
ctttataaagtgaaaaaaggcaagcaagagcgttatattcaagataacgatgaaatgtcg
caatatgaaattgatattgcattagaaggtgcaggcttatatgtgagtgaagatgctcca
gcgttaagtggcgtagcgttagagaacttaattgcccaatataacggcgtacaaaaatta
attgaacgtttaagccgtcgttacccaacattattacttaacgaattaatttattcaaaa
ccgctttcggtggaatttgcaaaaaatcaagcaaatatgaccgcttggagcgagcaattt
gtcgctacattgatggcaaaagaggtgggcggcagtttctaccgtattaataccttgttc
aatgaagaacgccaaatttatgagccggaaattattgtgactacacacggtatggacagt
acctatcgtttagattacaactttatcaacggtaatgaatacgctcgcattgtggcatta
ggcaacgagctgaacgatttactatctgattcagcctatgtggtgcgtggtgaacgtcgc
caagaaatcagcagttttgctgaagccttagattggttggtgaaagaatctcgtaaaggc
ttaactattcaacgttataaagggttaggtgagatgaatccggaacaattatgggaaacc
acgatggatccggtggctcgtaaaatgctacaggtcaatattaccgatgcgattgcggca
gataaactcttcagtacgctgatgggcgatgaagttgaaccacgccgagatttcattgaa
actaacgctttgtatgctcagttagatatttag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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