KEGG   Mannheimia haemolytica USDA-ARS-USMARC-183: D650_7900
Entry
D650_7900         CDS       T02523                                 
Name
(GenBank) radical SAM protein
  KO
K10026  7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
Organism
mhq  Mannheimia haemolytica USDA-ARS-USMARC-183
Pathway
mhq00790  Folate biosynthesis
mhq01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:mhq00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00790 Folate biosynthesis
    D650_7900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mhq03016]
    D650_7900
Enzymes [BR:mhq01000]
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.99  Other carbon-nitrogen lyases
    4.3.99.3  7-carboxy-7-deazaguanine synthase
     D650_7900
Transfer RNA biogenesis [BR:mhq03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    D650_7900
SSDB
Motif
Pfam: Radical_SAM Fer4_12 SCD
Other DBs
NCBI-ProteinID: AGI32059
Position
778286..778912
AA seq 208 aa
MAELISNPRFPIVEIFESLQGEGFNTGMPAIFVRFGKCNLTCPWCDTNYNQFEQWTLSDI
LAKVRSYSAKNVIITGGEPTIQPNLSLLLEQFKKEGYFLAIETNGLKEVPAQIDYIATSP
KRMYQEKYQRRCIEFANEVRIVVDGEVQGFCEQIESQIKAEHYYLSPCEVEGKMNLLETI
TQIGLLNQRPNKPKWQLSIQTHKIVGIE
NT seq 627 nt   +upstreamnt  +downstreamnt
atggcggagttaatttcaaaccctcgttttccgattgttgagatctttgaaagcttacaa
ggggaaggctttaataccggaatgccggctatttttgtacgttttggcaaatgcaacctc
acttgcccgtggtgcgataccaattacaatcaatttgagcaatggacgttaagcgatatt
cttgccaaagtaagaagctattctgcgaaaaatgtgattattaccggaggcgagccaacg
attcagcctaatttatcgttattattagaacaatttaaaaaagagggatattttttagcg
atcgaaaccaacggcttaaaagaggttccggcacaaattgattatattgcgaccagccca
aagcgaatgtaccaagaaaagtatcaacgccgttgcattgaatttgcgaatgaagtccgt
atcgtcgttgatggagaagtacagggtttctgtgagcaaatagaaagccaaattaaagct
gagcattactatctttcaccttgtgaggtagagggaaaaatgaacttgctggaaaccatc
acccagattgggttattaaatcagcgtccaaataagcctaaatggcagctaagtatccaa
acgcataaaattgtggggattgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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