KEGG   Mannheimia haemolytica USDA-ARS-USMARC-183: D650_8410
Entry
D650_8410         CDS       T02523                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
mhq  Mannheimia haemolytica USDA-ARS-USMARC-183
Pathway
mhq03030  DNA replication
mhq03430  Mismatch repair
mhq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mhq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D650_8410
   03430 Mismatch repair
    D650_8410
   03440 Homologous recombination
    D650_8410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mhq03032]
    D650_8410
   03400 DNA repair and recombination proteins [BR:mhq03400]
    D650_8410
Enzymes [BR:mhq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D650_8410
DNA replication proteins [BR:mhq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D650_8410
DNA repair and recombination proteins [BR:mhq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D650_8410
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 DNA_pol_IIIA_C tRNA_anti-codon HHH_3
Other DBs
NCBI-ProteinID: AGI32110
Position
829124..832600
AA seq 1158 aa
MSDCRFVHLKVHSDFSMINGLAKVKSLVKTAAANNMVAMGLTDFINFCGLVKFYGEALGA
GIKPIIGADVYVRTESGNEDYFELTLLAKNNKGYHNITQILSKAYQQGYVEFPMVEREWL
AELNEGIIILSGGRMGDVGKALLKENRQEAEEKLAFYQQYYPNHFYLSVCRTGRADEERY
IKQAVEFSQKNAIPLVAVNDVVFLKEDDFDAHEIRVAIHDSYTLDDPKRPKKYSPKQYFR
TEEEMCKLFADLPSALANTVEIAKRCSVTVRLGEYFLPNFPTGELSTEDFLVKKSKEGLE
ERLEFLFPDPEERANKRSVYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVAET
YGRQAVSQIITFGTMAAKAVIRDVGRVLGHPYSFVDRISKLIPPDPGMTLEKAFAAEPKL
PELYEADEEVKDLIDMARKLEGVTRNAGKHAGGVVIAPTAITDFSPLYCDSEGLHPVTHF
DKNDVEYAGLVKFDFLGLRTLTIIKWALEMINERLAREGKEPIRIETIPLDDKKSFALLL
AAKTTAVFQLESRGMKDLISRLKPDCFEDIIALVALFRPGPLESGMVQNFIDRKHGKEEV
SYPDPQYQHECLKPILEPTYGVIVYQEQVMQIAQELAGYTLGGADLLRRAMGKKKPEEMA
AQREVFEKGAEAKGIDGKLAGQIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAE
FMAAVMTSEMDNTDKIVGFYDECMNMGLTVVPPDVNSGKHRFSVNEKGEIVYGLGAIKGV
GEGPIEAILAARQKEGKFKDLFDLTARVDLKKINRRTFESLIMSGAFDKLGPHRAALMKN
LEDALKASDQHAKMEELGQSDMFGVLTETPEEVQNAYANTPKWSEQVILDGERATLGLYL
SGHPIGRFLKELSHYAPNRLNELQPTFRGQMTTVSGIVMASRVAVTKRGSRIGIATIEDR
SGKLDITLFSEALENFGHLMQQDQIIVATGSVQFDDFSGGLKMSAREVLSLDEARGRFAK
SLALAISKEQLSADFIKKMTAIITPHKEGTLPLHFYYQSPEGRVLLKGGVEWRISPNEAM
FSELKALLGENSVELEFE
NT seq 3477 nt   +upstreamnt  +downstreamnt
atgtcagattgtcgtttcgttcatttaaaagttcacagtgatttctcaatgattaatggt
ttagctaaggtaaaatccttagttaaaaccgctgccgctaataatatggtggcaatgggc
ttaacggattttataaacttttgcgggttggtgaaattctatggcgaagcattgggagca
gggattaagccgattatcggggcagatgtttatgttagaaccgagagcggcaatgaagat
tattttgagctgacattactggcgaagaacaacaaaggctaccataatattacccaaatt
ttgtccaaagcctatcagcaaggctatgtggaatttccgatggtggaacgtgaatggtta
gcagagctgaatgagggcatcatcattctttccggcgggcgaatgggcgatgtgggtaaa
gccttactcaaagaaaaccgacaagaagctgaagaaaaattagctttttatcagcaatat
tacccgaatcatttttacctttccgtttgccgtaccggacgggcagacgaagaacgctat
atcaaacaagcggtcgaattttcacaaaaaaatgcaattccgttagtggcggtaaatgat
gttgtcttcttgaaagaagatgactttgacgcacacgaaattcgggttgccattcacgac
agctacaccctagacgacccgaaacgcccgaaaaaatactcaccgaaacaatatttccgt
actgaagaggaaatgtgcaagctgtttgccgatttaccgagtgcattggcaaacacggtt
gaaattgcgaaacgctgttcggttaccgtgcgtttgggcgagtatttcctgccaaatttc
ccgaccggtgagctttccaccgaagatttcttggtaaaaaaatcgaaagaaggcttagaa
gagcgtttagagtttctattccctgatcctgaggaaagggcgaacaagcggtcggtttat
gacgaaagattgcaagttgaattagatgtgatcaaccaaatggggttcccgggttacttt
ttgatcgtgatggagtttatccaatggtccaaagataatgatattccggtaggaccgggt
cgtggctcaggggcaggctcattggtggcttatgcgttgaagattaccgatcttgaccca
ttggaatttgatttgctttttgagcgttttctcaaccctgagcgtgtttcaatgcccgat
tttgacgttgatttctgtatggacgggcgagaccgtgtgattgaacacgttgcggaaacc
tacgggcgacaagcggtatcgcaaattatcacattcggtactatggcggcgaaagcggtc
attcgagatgtagggcgagtgcttggacacccctatagctttgtggatcgcatctccaaa
ctcattccgcccgatccaggaatgacgcttgaaaaagcctttgccgctgagccaaaattg
cctgagctatatgaagccgatgaagaggtgaaagaccttattgatatggctcgtaagctc
gaaggtgtaactcgtaatgcaggtaaacacgctggtggtgtggtgatcgccccaactgcg
attaccgatttttcgccgctttattgcgatagcgagggcttacacccggttacccatttt
gataaaaatgacgtggaatatgcaggattggtgaagtttgacttcttaggcttgcgtacg
ctcaccatcatcaaatgggcgttggagatgattaacgaacgtttggctcgtgaaggcaaa
gagccgattcggattgaaaccattccgcttgatgataaaaaatcctttgctctgttgctg
gcagctaaaactacagcagtattccagcttgaatcacggggaatgaaagacttaatttct
cgcctgaagccggactgttttgaagatattatcgcattggtggcactattccgcccaggg
ccgctggaatcaggtatggtgcagaactttattgaccgtaaacacggcaaagaagaggtt
tcttatcctgatccgcaataccaacacgaatgcttaaaacctattctcgagccgacttat
ggggtcattgtttaccaagaacaggttatgcaaattgcacaagagcttgccggttataca
ctcggtggagcggacttactccgccgtgcaatgggtaagaagaaaccggaggaaatggct
gcacagcgtgaagtgtttgaaaaaggggcggaagccaaagggattgacggtaaacttgcc
ggtcaaatttttgacttggtagaaaagtttgccggctacggctttaataaatctcactca
gcagcttatgcgttggtttcttaccaaacactttggctaaaagcccattatccggcagaa
tttatggctgcggtaatgacctcagagatggataataccgataaaattgtcgggttctac
gatgagtgtatgaatatgggcttaaccgttgtgccgcctgatgtaaacagcggtaaacat
cgttttagcgtaaatgaaaaaggcgaaattgtttacgggctaggagcaattaaaggcgtt
ggggaaggaccgattgaggcaattctggcagctcgccaaaaagaggggaaatttaaagat
ctatttgatttaaccgctcgggtcgatctgaaaaaaatcaaccgccgcacctttgaaagc
ctgattatgtccggtgcttttgacaaattaggccctcaccgagctgccttgatgaagaat
ttggaagatgcacttaaagcctcagatcagcacgctaaaatggaggaactcgggcagagc
gatatgtttggcgtgcttaccgagacaccggaagaagtgcaaaatgcttacgccaatacg
ccaaaatggtcggagcaagtgattttagatggagagcgtgccacgctcgggctgtattta
agcggacacccgattggtagattcctcaaagaattatcccactatgcccctaatcggctg
aatgaattgcaaccgactttccgagggcaaatgaccacggtttcaggaattgttatggca
tctcgagtggcagttaccaagcgaggaagccgtattgggattgcgactattgaagatcgc
tcggggaaattggacattacccttttctcggaagccttagaaaatttcgggcatttgatg
caacaagaccaaattattgtggcaacaggttcggtacagtttgatgatttcagcggtgga
ctgaaaatgtcggctcgagaagtgttatcccttgatgaagcaaggggtcgatttgccaaa
agtttagcgttagcgattagcaaagagcaactttctgcagattttattaaaaaaatgacc
gctatcatcaccccacataaagaaggcactttaccgctgcatttttattaccaaagcccg
gaaggtagggtattgctcaaaggcggagtagagtggcgaatcagcccgaatgaggcaatg
tttagcgaattaaaggcacttcttggtgagaattcggttgaactggaatttgaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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