KEGG   Mannheimia haemolytica USDA-ARS-USMARC-185: D648_5840Help
Entry
D648_5840         CDS       T02522                                 

Gene name
aspS
Definition
(GenBank) aspartate--tRNA ligase
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
mht  Mannheimia haemolytica USDA-ARS-USMARC-185
Pathway
mht00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:mht00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    D648_5840 (aspS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:mht01007]
    D648_5840 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mht03016]
    D648_5840 (aspS)
   03029 Mitochondrial biogenesis [BR:mht03029]
    D648_5840 (aspS)
Enzymes [BR:mht01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     D648_5840 (aspS)
Amino acid related enzymes [BR:mht01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   D648_5840 (aspS)
Transfer RNA biogenesis [BR:mht03016]
 Eukaryotic Type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    D648_5840 (aspS)
 Prokaryotic Type
   Other AARSs
    D648_5840 (aspS)
Mitochondrial biogenesis [BR:mht03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    D648_5840 (aspS)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: tRNA-synt_2 GAD tRNA_anti-codon tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID: AGI34588
Position
1952222..1953988
Genome map
AA seq 588 aa AA seqDB search
MMRSHYCGALNRSHLGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQ
ASALRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNLVVYNNAEVLPLDFNQNNTEE
QRLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP
SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFM
TAEEVRALMEAMIHGLWKETLGVDLGKFPMMTWNEAMTRFGSDKPDLRNPLEMVDVADIL
KSVDFKVFSGPANDPKGRVVALRVPNGAALTRKNIDDYTQFVGIYGAKGLAWLKVNDMNT
GLEGIQSPVAKFLNEEVLKALVKRLNLQKDDIVFFGADNWHVATNAIGALRLKVGNDLGL
TDTTAWKPLWVIDFPMFERDDEGNLSAMHHPFTSPKELSPEELVQDPENAVANAYDMVIN
GYEVGGGSVRIFSQQMQQTVFSILGINEEEQKEKFGFLLDALKFGTPPHAGLAFGLDRLT
MLITGTDNIRDVIAFPKTTAAACLMTEAPSYANPKALEELAIRTIPQE
NT seq 1767 nt NT seq  +upstreamnt  +downstreamnt
atgatgcgttctcactactgcggtgcattaaaccgctcacaccttggacaaacagttacc
ttaagcggttgggttcatcgtgttcgtaaccttggtcgttttatttttatgcaaattcgt
gatcgtgaaggcattgtgcaggtgtttttcgatgagaaagatgaagcacttttcaagcaa
gcatcggccttacgttctgaggcgtgcgtgcaaattcaaggtgaagtgattgcccgtgat
gaatcgcaaatcaataaagagatggcaaccggtgaaattgaagtgttagtaaaaaattta
gtggtgtataacaacgctgaagtattgccgttagacttcaatcaaaacaataccgaagaa
cagcgtttaaaataccgctatttggatttacgccgccctgaaatggcagaaaagctcaaa
acccgtgctaaaatcaccagttttgtccgccgttttatggacgataacggtttcttagac
attgaaaccccgatgctgaccaaagctactcctgaaggtgcgagagattacctcgtgcca
agccgtgtgcataaaggcaaattctatgctctgccacaatcacctcagctatttaaacag
ttgctaatgatgtcgggcttcgaccgttattaccaaatcgtgaaatgtttccgtgatgaa
gatttgcgtgccgaccgccagccggaatttacccaaatagacgtggaaaccagctttatg
actgccgaagaagtgcgtgcattaatggaagcgatgatccacggcttatggaaagagacc
ttaggcgttgatctcggtaaattcccaatgatgacgtggaatgaagcaatgacccgtttc
ggttcagacaaaccggatttgcgtaacccactggaaatggttgatgtggcagatatttta
aaatcggttgatttcaaagtatttagcggtccggcgaatgatccgaaagggcgtgtagtg
gcacttcgtgtgccaaacggtgcagctctaacccgtaaaaatattgatgactacacccaa
tttgtcggcatttatggggcaaaaggcttggcttggttaaaagtgaatgatatgaacaca
ggtttagaaggcattcaaagcccggttgcaaaattcttaaatgaagaagtgctaaaagcc
ttagttaaacgcttaaacttgcaaaaagacgacattgtattcttcggtgcggataactgg
cacgttgcgactaacgccatcggtgcgttacgcttaaaagtggggaacgatttaggctta
accgataccacagcgtggaaaccgttatgggtgattgatttcccaatgtttgaacgtgat
gatgaaggcaacttatcggcaatgcaccacccgttcacttcaccgaaagaattatcgccg
gaagaattagtgcaagatccggaaaatgcggtggcaaacgcttacgatatggtaattaac
ggctacgaagtgggcggtggctcggtacgtattttcagccagcagatgcaacaaaccgtg
ttcagcattttaggcattaacgaagaagagcaaaaagagaaattcggtttcttattagat
gcgttaaaattcggtactccgccacacgcaggcttagccttcggtttagaccgcttaacg
atgttgattacaggaactgataacattcgtgatgtcatcgctttcccgaaaaccaccgct
gcagcgtgtttaatgacagaagcaccaagctatgcgaatccgaaagcgttggaagagtta
gcaatccgtacaattccacaagagtaa

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